Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq4 161 9e-35 seq1 156 4e-33 seq3 125 7e-24 seq6 111 1e-19 seq5 102 8e-17 seq2 102 8e-17 >seq4 Length=23292877 Score = 161 bits (178), Expect = 9e-35 Identities = 176/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| ||||| || || | ||| || || || || ||||||||| ||||| ||||||| Sbjct 18773422 CGCCACCGCGGAGGCGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGG 18773363 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 ||||||||| |||| |||||||||||||||||||| || |||||||| ||||||| | Sbjct 18773362 CGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCG 18773303 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | | || |||||||||| || | || || | ||| | | | |||||| |||||| Sbjct 18773302 GGATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCC 18773244 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| | || || || || ||||| || || || ||||| ||||||||| Sbjct 18773243 ACCTCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATG 18773193 >seq1 Length=22681039 Score = 156 bits (172), Expect = 4e-33 Identities = 177/234 (76%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| ||||| || || | |||||| || || || ||||||||| ||||| ||||||| Sbjct 22555131 CGCCACCGCGGAGGCGGAGCACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGG 22555190 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 ||| || || |||| |||||||| || |||||||| || |||||||| ||||||| | Sbjct 22555191 CGAGAGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCG 22555250 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGA-CGACACAGTGTCGCTCGACTC 41811 | | || ||||||||| ||| || ||||| | | ||| |||||| ||||| Sbjct 22555251 GGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTATCGATG--GTGTCGGAGGACTC 22555308 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||||||| ||| ||||| || ||||| || || || ||||| |||||||| || Sbjct 22555309 CACCTCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 22555362 Score = 138 bits (152), Expect = 1e-27 Identities = 174/234 (74%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| ||||| || || | |||||| || || || ||||||||| ||||| ||| ||| Sbjct 22583149 CGCCACCGCGGAGGCGGAGCACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGACGG 22583208 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCG 41752 ||| || || |||| ||||||| || ||| |||| || ||||| || |||||| ||| Sbjct 22583209 CGAGAGTCCGGCCGTCCTCGAGCTATTTTCCGACGAAGATAAGGCGTTGCTGGTCCAGCG 22583268 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811 ||| || ||||||||| ||| || ||||| | | | | |||||| ||||| Sbjct 22583269 GGAT-GCCCTCCTTGTCTTGGATCTTGGCCTTCA-CATTGTCGATGGTGTCGGAGGACTC 22583326 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||||||| ||| ||||| || ||||| || || || ||||| |||||||| || Sbjct 22583327 CACCTCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 22583380 >seq3 Length=27879571 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| ||| || || ||||||||| ||||| || || | Sbjct 183779 CCACCACGCAGACGAAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCA 183720 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || ||||||||||| || || ||||| ||||| ||||||| ||| Sbjct 183719 AGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 183660 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| | || || | |||| | | | ||||| |||||||| Sbjct 183659 ATTCCCTCCTTGTCC-TGAATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCAC 183601 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || || || || || |||||||| ||||| Sbjct 183600 CTCAAGGGTGATAGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCAT 183553 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| ||| || ||| |||||||| ||||| ||||| | Sbjct 184235 CCACCACGGAGACGAAGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCC 184176 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || |||||||| ||||| || || || | ||| ||||| | || Sbjct 184175 AGGGTACGGCCATCCTCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGG 184116 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTC---GCTCGACTC 41811 | | |||||||||| ||| || ||| | | | || | |||| |||| || Sbjct 184115 ATACCCTCCTTGTCCTGGATCTTGGCCTTGA-CATTGTCAATGGTGTCAGAGCTC---TC 184060 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| || || || || || |||| ||||| ||||| |||||||| Sbjct 184059 CACCTCCAAGGTGATGGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 184009 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || || || ||| ||||||||||||||| || || | Sbjct 13657362 CCACCACGGAGGCGAAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCTGCA 13657303 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | | | || || |||||||| || |||||||| || | ||| ||||| | ||| Sbjct 13657302 AGAGTCCTCCCATCCTCAAGCTGCTTTCCAGCGAATATGAGCCTCTGCTGGTCTGGGGGG 13657243 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA--CTCCA 41813 | || |||||| ||| ||| | || |||| || | || | || || | ||| | Sbjct 13657242 ATGCCCTCCTTATCC-TGAATCTTGGCTTTCACATTGTCA-ATCGTATCTGAACTCTCTA 13657185 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| ||||| || || || ||||| || || || || |||||||| Sbjct 13657184 CCTCCAATGTTATGGTCTTCCCTGTCAGAGTTTTGACAAAGATCTGCAT 13657136 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | ||| | ||||| ||| |||||| ||||| |||||||| | Sbjct 13841302 CCACCGCGCAGACGAAGCACTAATTGCAGAGTGGACTCCTTTTGAATATTATAGTCAGCA 13841361 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | | || || ||||||||||| || || |||| | |||||||| | |||| Sbjct 13841362 AGTGTCCTTCCATCCTCAAGCTGCTTGCCTGCAAAAATCAACCTTTGTTGGTCTGGGGGA 13841421 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | | |||||||| | ||| |||| |||| || | | ||||| ||| || Sbjct 13841422 ATACCCTCCTTGT-CTTGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCT---TTC 13841477 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| | || ||||| || || || ||||| || || || |||||| Sbjct 13841478 GACTTCCACAATGATGGTTTTGCCAGTAAGGGTCTTGACAAAGATTTGCATG 13841529 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| || || ||||| | || || ||| |||| || |||||||||||||| || Sbjct 184428 CTCCTTCTGGATATTGTAGTCTGCAAGAGTACGCCCGTCCTCAAGCTGCTTGCCGGCAAA 184369 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 || || | ||| ||||| | |||| | |||||||| | ||| | || || | || Sbjct 184368 GATAAGCCTCTGCTGGTCTGGTGGAATCCCCTCCTTGT-CTTGAATCTTGGCCTTCACAT 184310 Query 41791 CGAC-ACAGTGTC---GCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCT 41846 | | | ||||| ||| ||||||||| | || || || || || || || |||| Sbjct 184309 TGTCAATGGTGTCTGAGCT---CTCCACCTCAAGGGTGATGGTCTTCCCTGTAAGGGTCT 184253 Query 41847 TTACGAAAATCTGCAT 41862 | || ||||||||||| Sbjct 184252 TGACAAAAATCTGCAT 184237 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || | | ||| || || || || ||||||||| || || ||||| | Sbjct 6885707 GCCACCACGAAGCCTGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATATTGTAGTCTGC 6885648 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||| || |||| ||||||||||| ||||| || || || | ||||||||| | || Sbjct 6885647 GAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTGGTCTGGAGG 6885588 Query 41755 AACGCTCTCCTTGTCCATGATTTT 41778 | || |||||||||| ||| || Sbjct 6885587 GATGCCCTCCTTGTCCTGGATCTT 6885564 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || | | |||||| || || || ||||| ||||| || ||||| | Sbjct 13656451 GCCACCGCGGAGTCTGAGCACCAGGTGTAGAGTCGATTCCTTTTGAATATTGTAGTCAGC 13656392 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || ||||||||||| || || || ||||| | || ||||| | ||| Sbjct 13656391 AAGGGTGCGTCCATCCTCGAGCTGCTTTCCAGCAAAAATCAGTCTTTGCTGGTCTGGGGG 13656332 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 || || ||||| | | || |||| |||| || | | | ||||| ||| | Sbjct 13656331 AATGCCTTCCTTAT-CTTGGATTTTGGCTTTGACATTGTCGATGGTGTCAGAGCT---TT 13656276 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||| | || || || || || || || ||||| ||||| |||||||| Sbjct 13656275 CAACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 13656224 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| ||||||| || || || ||||||||||| || ||||| | Sbjct 13656907 GCCACCACGGAGACGCAACACCAAGTGAAGAGTTGATTCCTTCTGAATATTGTAGTCCGC 13656848 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || || ||||| || || || || || || | ||| ||||| | || Sbjct 13656847 AAGAGTGCGACCATCCTCTAGCTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTCTGGAGG 13656788 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGAC--TCC 41812 || || ||| |||||| ||| | ||||| | || | | | ||| || || || Sbjct 13656787 AATGCCCTCTTTGTCC-TGAATCTTTGCCTTGAC-ATTATCAATTGTATCTGAACTTTCA 13656730 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||| || || || || || || || ||||| || || || |||||| Sbjct 13656729 ACCTCCAAGGTGATTGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCATG 13656679 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || | | |||||| || || ||| ||| || |||||||| ||||| | Sbjct 13774455 GCCACCACGGAGTCTAAGCACCAGGTGGAGGGTGGACTCTTTTTGAATGTTGTAGTCAGC 13774396 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || |||| |||||||||||||| || || ||||| | || ||||| | ||| Sbjct 13774395 AAGTGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCTGGGGG 13774336 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | | |||||||| | || | ||||| | || | | | |||||| ||| | Sbjct 13774335 GATTCCCTCCTTGT-CTTGGATCTTTGCCTTGACATTGTCAATAGTGTCAGAGCT---TT 13774280 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||| | || || || || || || || || || || || |||||||| Sbjct 13774279 CAACCTCGAGGGTGATAGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 13774228 >seq6 Length=38222195 Score = 111 bits (122), Expect = 1e-19 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | |||||| || || || ||||||||| ||||| ||||||| | || || Sbjct 34538190 AGACGGAGCACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTCCGG 34538249 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| ||||||||||| |||||||| || || | ||| ||||| | || | || |||| Sbjct 34538250 CCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCCTCC 34538309 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823 |||||| || | || || | ||| | | | |||||| ||| ||||| | || Sbjct 34538310 TTGTCC-TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCAACCTCGAGGGT 34538368 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || || || ||||| || || ||||| ||||||||| Sbjct 34538369 GATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCATG 34538408 Score = 104 bits (114), Expect = 2e-17 Identities = 140/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 41675 TTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 41734 ||||| ||||| ||||||| | |||||| |||| ||||||||||| |||||||| || Sbjct 22063129 TTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATG 22063070 Query 41735 AGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACG 41792 || ||||| || || | || | || |||||||| ||| || ||| || | || Sbjct 22063069 AGACGCTGCTGATCAGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCG 22063010 Query 41793 ACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 | |||||||| ||||||||| | || || || || ||||| || || || |||| Sbjct 22063009 --ATGGTGTCGCTGCTCTCCACCTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACGA 22062952 Query 41853 AAATCTGCATGTT 41865 | |||||||| || Sbjct 22062951 ATATCTGCATCTT 22062939 Score = 100 bits (110), Expect = 3e-16 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | |||| || || ||| ||||||||||||||| || || | Sbjct 34519594 CCGCCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCC 34519653 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGGG 41754 ||||| || |||| ||||||||||||||||| || |||| | || |||||| | ||| Sbjct 34519654 AGGGTACGACCGTCCTCGAGCTGCTTGCCGGCAAAGATCAACCTTTGCTGGTCCGGTGGG 34519713 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTC 41811 | | || ||||| ||| || | || |||| || | | || || ||| ||| Sbjct 34519714 ATCCCT-TCCTTATCC-TGGATCTTGGCTTTGAC-ATTA-TCAATGGTATCCGAGCTCTC 34519769 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || || || || |||| ||||| || ||||||||||| Sbjct 34519770 AACCTCCAAAGTGATGGTCTTGCCTGTCAAAGTCTTCACAAAAATCTGCAT 34519820 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/229 (70%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | ||||| ||| || || ||||||||| ||||| || || | Sbjct 34537952 CCACCGCGAAGACGGAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAGCC 34538011 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 | ||| | |||| ||||||||||| |||||||| |||| | ||| || || | ||| Sbjct 34538012 AAGGTCCTACCGTCCTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCTGGGGGG 34538071 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | || |||||||| || | || || | ||| | | | |||||| ||| | Sbjct 34538072 ATCCCTTCCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGA 34538130 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || ||||| || || || || || || ||||| |||||||| Sbjct 34538131 CCTCGAGAGTGATCGTCTTTCCGGTTAGGGTTTTCACGAAGATCTGCAT 34538179 >seq5 Length=29328693 Score = 102 bits (112), Expect = 8e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || | | ||| || || || || ||||||||| || || ||||| | Sbjct 19804431 GCCACCACGAAGCCTGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATATTGTAGTCAGC 19804372 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||| || |||| ||||||||||| ||||| || || || | |||||| || | || Sbjct 19804371 GAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGTTGATCTGGAGG 19804312 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| || | || |||| ||| | | | |||||| ||||| Sbjct 19804311 GATGCCCTCCTTGTCC-TGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCA 19804253 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || | || || || || |||||||| || || |||||| || Sbjct 19804252 CCTCGAGGGTGACGGTCTTGCCGGTAAGCGTCTTCACAAAGATCTGCCTG 19804203 >seq2 Length=33308843 Score = 102 bits (112), Expect = 8e-17 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || |||||||| | ||||| |||||| || ||| ||||||||||| || || | Sbjct 6938605 CCACCACGTAGACGGAGCACCAAATGCAGAGTCGACTCTTTCTGAATGTTGTAATCTGCC 6938664 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | |||| || |||||||| || || || || || | ||| ||||| | |||| Sbjct 6938665 AGTGTCCTGCCGTCCTCAAGCTGCTTTCCTGCAAAGATAAGCCTCTGCTGGTCTGGGGGA 6938724 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGAC--TCCA 41813 | || || |||||| ||| | ||||| | ||| || | ||| || | |||| Sbjct 6938725 ATGCCTTCTTTGTCC-TGAATCTTTGCCTTGACGTTATCA-ATTGTGTCTGAGCTTTCCA 6938782 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | |||| || || ||||| || |||| ||||| || ||||| ||||| Sbjct 6938783 CTTCCAAAGTAATGGTTTTCCCGGTCAAAGTCTTCACAAAAATTTGCAT 6938831 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| || || ||| ||| || || ||||| || || | ||| || ||| |||| || Sbjct 6939306 ACCAAGTGGAGAGTGGACTCTTTTTGGATGTTGTATTCAGCGAGTGTCCGCCCGTCCTCA 6939365 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || ||||| | ||| |||||| ||||| | |||||||| | || Sbjct 6939366 AGCTGCTTGCCAGCAAAGATCAGCCTTTGTCGGTCCGGGGGAATTCCCTCCTTGT-CTTG 6939424 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCACCGTTATCGT 41829 | ||||||| || | | | |||||| ||| || ||||| | || || || Sbjct 6939425 GATCTTTGCTTTGACATTGTCAATAGTGTCAGAGCT---TTCAACCTCAAGGGTGATGGT 6939481 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || || || || || |||||||| Sbjct 6939482 CTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 6939514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462286386217600