Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20x_20ananassa_20[genbank_20GCA_5F000511835.1_202013-12-06]
625,966 sequences; 697,762,269 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq25161 86.0 5e-12
seq592805 82.4 6e-11
>seq25161
Length=2200
Score = 86.0 bits (94), Expect = 5e-12
Identities = 77/97 (79%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 29075 AGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGA 29134
|||||| || || || |||||||| |||||||| || || ||| | || | |||||
Sbjct 674 AGATCAGCAGAGGCTCATCTTTGCCGGCAAACAGCTAGAGGATGGCCGCACCCTTGCCGA 733
Query 29135 TTACAATATTCAGAAGGAATCTACTCTTCACATGGTG 29171
||||||||| || ||||| |||||||||||| |||||
Sbjct 734 TTACAATATCCAAAAGGAGTCTACTCTTCACCTGGTG 770
>seq592805
Length=13616
Score = 82.4 bits (90), Expect = 6e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114
||||| || || | ||| ||||| || ||| | |||||||| || || || ||||
Sbjct 383 GATAAGGAGGGAATTCCCCCGGATCAGCAGAGATTGATCTTTGCCGGTAAGCAGTTGGAG 442
Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174
|| || || |||||||||||||||| |||||||| || || |||||| ||||| |
Sbjct 443 GACGGCAGGACCCTGGCCGATTACAATATCCAGAAGGAGTCGACCCTTCACTTGGTGCTC 502
Query 29175 CGATT 29179
|||||
Sbjct 503 CGATT 507
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425068241521730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |