Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20x_20ananassa_20[genbank_20GCA_5F000511835.1_202013-12-06]
625,966 sequences; 697,762,269 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq581596 82.4 6e-11
>seq581596
Length=910
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059
||||| || | ||| ||||| ||||| ||||||||||| | | |||| | ||| |||
Sbjct 437 ACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAATCTGCAAGAGTTCTTCCATCCTCC 496
Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119
|| ||||| || ||| | || |||||||| ||||| ||| | || || |||||
Sbjct 497 AACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGG 556
Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179
|| ||| ||| || | | ||| | ||| |||| |||| || || || ||
Sbjct 557 ATCTTTGCTTTAACATTGTCAATTGTATCAGAGCTTTCCACCTCCAATGTGATTGTCTTC 616
Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCATT 20209
|| || | || || ||||| |||||||||
Sbjct 617 CCAGTAAGGGTCTTCACAAAGATTTGCATT 646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 416386185772446
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |