Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20x_20ananassa_20[genbank_20GCA_5F000511835.1_202013-12-06]
625,966 sequences; 697,762,269 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq538303 113 2e-20
seq500063 113 2e-20
seq375938 113 2e-20
seq383239 109 3e-19
seq379743 109 3e-19
seq512598 107 1e-18
seq457825 107 1e-18
seq365461 107 1e-18
seq540479 105 3e-18
seq25092 105 3e-18
seq13883 105 3e-18
seq623193 104 1e-17
seq597215 104 1e-17
seq571075 104 1e-17
seq351079 104 1e-17
seq288228 104 1e-17
seq251633 104 1e-17
seq588276 102 4e-17
seq550898 102 4e-17
seq378379 102 4e-17
seq594106 100 1e-16
seq507907 100 1e-16
seq512482 98.7 5e-16
seq339796 98.7 5e-16
seq336979 98.7 5e-16
seq463126 96.9 2e-15
seq443210 96.9 2e-15
seq321467 96.9 2e-15
seq191436 96.9 2e-15
seq34776 96.9 2e-15
seq23964 96.9 2e-15
seq562234 95.1 6e-15
seq502643 95.1 6e-15
seq581425 93.3 2e-14
seq578873 93.3 2e-14
seq548071 93.3 2e-14
seq398516 93.3 2e-14
seq314920 93.3 2e-14
seq163343 93.3 2e-14
seq62881 93.3 2e-14
seq609404 91.5 8e-14
seq577240 91.5 8e-14
seq558705 91.5 8e-14
seq534135 91.5 8e-14
seq530077 91.5 8e-14
seq492356 91.5 8e-14
seq461176 91.5 8e-14
seq322604 91.5 8e-14
seq35078 91.5 8e-14
seq441219 89.7 3e-13
seq358620 87.8 9e-13
seq551877 86.0 3e-12
seq301982 86.0 3e-12
seq615233 84.2 1e-11
seq171787 84.2 1e-11
>seq538303
Length=2540
Score = 113 bits (124), Expect = 2e-20
Identities = 76/86 (88%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504
|||||| ||| ||||||||| | | |||||||| |||||||||||||||||||||||||
Sbjct 253 AAAAATAAAACTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACG 194
Query 11505 CTCTRACCAACTGAGCTAATGGGCCG 11530
|||| |||| |||||||||| |||||
Sbjct 193 CTCTAACCAGCTGAGCTAATAGGCCG 168
>seq500063
Length=674
Score = 113 bits (124), Expect = 2e-20
Identities = 84/98 (86%), Gaps = 1/98 (1%)
Strand=Plus/Minus
Query 11447 AAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCT 11506
|||| ||||||||||||| | | |||||||| |||||||||||||||||||||||||||
Sbjct 517 AAATTAAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCT 458
Query 11507 CTRACCAACTGAGCTAATGGGCC-GTCGACGATTGTGA 11543
|| |||| |||||||||| |||| | || || |||||
Sbjct 457 CTAACCAGCTGAGCTAATAGGCCACTTGATGACTGTGA 420
>seq375938
Length=503
Score = 113 bits (124), Expect = 2e-20
Identities = 89/105 (85%), Gaps = 2/105 (2%)
Strand=Plus/Minus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
|||| |||| ||||| |||||||| | | |||||||| |||||||||||||||||||||
Sbjct 236 AATAGAAAAACAAAT-GGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 178
Query 11501 GACGCTCTRACCAACTGAGCTAAT-GGGCCGTCGACGATTGTGAT 11544
|||||||| |||| |||||||||| |||| || || | ||||||
Sbjct 177 GACGCTCTAACCAGCTGAGCTAATAGGGCAGTTGATGCCTGTGAT 133
>seq383239
Length=415
Score = 109 bits (120), Expect = 3e-19
Identities = 76/86 (88%), Gaps = 2/86 (2%)
Strand=Plus/Plus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
||||||| |||||||||||| | | |||||||| ||||||||||||||||||||||||
Sbjct 148 AAAAAAT--AATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGAC 205
Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529
||||| |||| |||||||||| ||||
Sbjct 206 GCTCTAACCAGCTGAGCTAATAGGCC 231
>seq379743
Length=392
Score = 109 bits (120), Expect = 3e-19
Identities = 77/89 (87%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
|| ||||||| | |||||||||| | | |||||||| |||||||||||||||||||||
Sbjct 139 AAAAAAAAATTTAGTTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 198
Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||| |||| |||||||||| ||||
Sbjct 199 GACGCTCTAACCAGCTGAGCTAATAGGCC 227
>seq512598
Length=4094
Score = 107 bits (118), Expect = 1e-18
Identities = 80/93 (86%), Gaps = 1/93 (1%)
Strand=Plus/Plus
Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496
||| |||||| ||| | |||||||||| | | |||||||| |||||||||||||||||
Sbjct 883 AATGAATAAATAATTAG-TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTA 941
Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||||||| |||| |||||||||| ||||
Sbjct 942 GCACGACGCTCTAACCAGCTGAGCTAATAGGCC 974
>seq457825
Length=4987
Score = 107 bits (118), Expect = 1e-18
Identities = 77/88 (88%), Gaps = 1/88 (1%)
Strand=Plus/Minus
Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501
|||||| |||| |||||||||| | | |||||||| ||||||||||||||||||||||
Sbjct 4414 ATAAAACATCAT-TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACG 4356
Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||| |||| |||||||||| ||||
Sbjct 4355 ACGCTCTAACCAGCTGAGCTAATAGGCC 4328
>seq365461
Length=751
Score = 107 bits (118), Expect = 1e-18
Identities = 80/93 (86%), Gaps = 1/93 (1%)
Strand=Plus/Minus
Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496
||| |||||| ||| | |||||||||| | | |||||||| |||||||||||||||||
Sbjct 261 AATGAATAAATAATTAG-TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTA 203
Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||||||| |||| |||||||||| ||||
Sbjct 202 GCACGACGCTCTAACCAGCTGAGCTAATAGGCC 170
>seq540479
Length=340
Score = 105 bits (116), Expect = 3e-18
Identities = 74/84 (88%), Gaps = 2/84 (2%)
Strand=Plus/Minus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
|| |||||| ||||||||||||| | | |||||||| |||||||||||||||||||||
Sbjct 83 AACAAAAAA--AAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 26
Query 11501 GACGCTCTRACCAACTGAGCTAAT 11524
|||||||| |||| ||||||||||
Sbjct 25 GACGCTCTAACCAGCTGAGCTAAT 2
>seq25092
Length=1851
Score = 105 bits (116), Expect = 3e-18
Identities = 85/104 (82%), Gaps = 6/104 (6%)
Strand=Plus/Plus
Query 11433 ATAGAATTAATAAAAAATCAAA------TTGGCCCATGAAAGGATCGAACCTTCGACCTT 11486
|||| |||| ||||||| || |||||||||| | | |||||||| |||||||
Sbjct 1284 ATAGTTTTAACAAAAAATTAATAATTAGTTGGCCCATGCAGGTCTCGAACCTGCGACCTT 1343
Query 11487 CGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530
|||||||||||||||||||||| |||| |||||||||| |||||
Sbjct 1344 CGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCCG 1387
>seq13883
Length=2961
Score = 105 bits (116), Expect = 3e-18
Identities = 77/89 (87%), Gaps = 1/89 (1%)
Strand=Plus/Plus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
|||| ||| ||||| |||||||| | | |||||||| |||||||||||||||||||||
Sbjct 1453 AATAGGAAAACAAAT-GGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 1511
Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||| |||| |||||||||| ||||
Sbjct 1512 GACGCTCTAACCAGCTGAGCTAATAGGCC 1540
>seq623193
Length=316
Score = 104 bits (114), Expect = 1e-17
Identities = 76/88 (86%), Gaps = 2/88 (2%)
Strand=Plus/Plus
Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501
|||||||| |||||||||||| | | |||||||| |||||||||||||||||||||
Sbjct 74 ATAAAAAA--AAATTGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACG 131
Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||| |||| |||||||||| ||||
Sbjct 132 ACGCTCTAACCAGCTGAGCTAATAGGCC 159
>seq597215
Length=3754
Score = 104 bits (114), Expect = 1e-17
Identities = 84/101 (83%), Gaps = 6/101 (6%)
Strand=Plus/Minus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
||||||||| | ||||||||| | | |||||||| |||||||||||||||||||||
Sbjct 3163 AATAAAAAA----AATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 3108
Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC--GTCGACGATT 11539
|||||||| |||| |||||||||| |||| || ||| |||
Sbjct 3107 GACGCTCTAACCAGCTGAGCTAATAGGCCATGTTGACAATT 3067
>seq571075
Length=3477
Score = 104 bits (114), Expect = 1e-17
Identities = 84/101 (83%), Gaps = 6/101 (6%)
Strand=Plus/Plus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
||||||||| | ||||||||| | | |||||||| |||||||||||||||||||||
Sbjct 1074 AATAAAAAA----AATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 1129
Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC--GTCGACGATT 11539
|||||||| |||| |||||||||| |||| || ||| |||
Sbjct 1130 GACGCTCTAACCAGCTGAGCTAATAGGCCATGTTGACAATT 1170
Score = 93.3 bits (102), Expect = 2e-14
Identities = 77/94 (82%), Gaps = 2/94 (2%)
Strand=Plus/Plus
Query 11448 AATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTC 11507
||| ||| ||||||||| | | ||||| || |||||||||||||||||||||||||||
Sbjct 1815 AATAAAAATGGCCCATGCAGGTCTCGAATCTATGACCTTCGCGTTATTAGCACGACGCTC 1874
Query 11508 TRACCAACTGAGCTAATGGGCC--GTCGACGATT 11539
| |||| |||||| ||| |||| || ||| |||
Sbjct 1875 TAACCAGCTGAGCCAATAGGCCATGTTGACAATT 1908
>seq351079
Length=476
Score = 104 bits (114), Expect = 1e-17
Identities = 78/91 (86%), Gaps = 1/91 (1%)
Strand=Plus/Plus
Query 11435 AGAATTAATAAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTA 11493
||||| |||||||||| ||| |||||||| | | |||||||| |||||||||||||
Sbjct 386 AGAATAAATAAAAAATAAAAAATGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTA 445
Query 11494 TTAGCACGACGCTCTRACCAACTGAGCTAAT 11524
||||||||||||||| |||| ||||||||||
Sbjct 446 TTAGCACGACGCTCTAACCAGCTGAGCTAAT 476
>seq288228
Length=308
Score = 104 bits (114), Expect = 1e-17
Identities = 74/86 (86%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504
|||||| ||| ||| ||||| | | |||||||| ||||||||||||||||| |||||||
Sbjct 62 AAAAATAAAACTGGACCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAACACGACG 121
Query 11505 CTCTRACCAACTGAGCTAATGGGCCG 11530
|||| |||| |||| |||||||||||
Sbjct 122 CTCTAACCAGCTGAACTAATGGGCCG 147
>seq251633
Length=327
Score = 104 bits (114), Expect = 1e-17
Identities = 78/92 (85%), Gaps = 4/92 (4%)
Strand=Plus/Minus
Query 11441 AATAAAAAATCAA----ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496
|| ||||||| || ||||||||||| | | |||||||| |||||||||||||||||
Sbjct 92 AAAAAAAAATTAATTGGATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTA 33
Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGC 11528
|||||||||||| |||| |||||||||| |||
Sbjct 32 GCACGACGCTCTAACCAGCTGAGCTAATAGGC 1
>seq588276
Length=4771
Score = 102 bits (112), Expect = 4e-17
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
|||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 1947 TTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAG 2006
Query 11515 CTGAGCTAATGGGCC 11529
|||||||||| ||||
Sbjct 2007 CTGAGCTAATAGGCC 2021
>seq550898
Length=371
Score = 102 bits (112), Expect = 4e-17
Identities = 75/87 (86%), Gaps = 2/87 (2%)
Strand=Plus/Minus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
|||||| || ||||||||| | | |||||||| ||||||||||||||||||||||||
Sbjct 195 AAAAAAACAC--TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGAC 138
Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530
||||| |||| |||||||||| |||||
Sbjct 137 GCTCTAACCAGCTGAGCTAATAGGCCG 111
>seq378379
Length=394
Score = 102 bits (112), Expect = 4e-17
Identities = 74/85 (87%), Gaps = 1/85 (1%)
Strand=Plus/Plus
Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504
|||||| | |||||||||| | | |||||||| |||||||||||||||||||||||||
Sbjct 146 AAAAATTAG-TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACG 204
Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529
|||| |||| |||||||||| ||||
Sbjct 205 CTCTAACCAGCTGAGCTAATAGGCC 229
>seq594106
Length=803
Score = 100 bits (110), Expect = 1e-16
Identities = 74/86 (86%), Gaps = 2/86 (2%)
Strand=Plus/Minus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
||||||| ||||||||||| | | |||||||| |||||||||||||||||||||||
Sbjct 424 AAAAAAT--AATTGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACGAC 367
Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529
||||| |||| |||||||||| ||||
Sbjct 366 GCTCTAACCAGCTGAGCTAATAGGCC 341
>seq507907
Length=379
Score = 100 bits (110), Expect = 1e-16
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| |
Sbjct 379 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 320
Query 11516 TGAGCTAATGGGCC 11529
||||||||| ||||
Sbjct 319 TGAGCTAATAGGCC 306
>seq512482
Length=3955
Score = 98.7 bits (108), Expect = 5e-16
Identities = 68/78 (87%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511
|||||||||||| | | |||||||| |||||||||||||||||||||||||||| ||
Sbjct 1169 AAATTGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 1228
Query 11512 CAACTGAGCTAATGGGCC 11529
|| |||||||||| ||||
Sbjct 1229 CAGCTGAGCTAATAGGCC 1246
>seq339796
Length=521
Score = 98.7 bits (108), Expect = 5e-16
Identities = 76/90 (84%), Gaps = 2/90 (2%)
Strand=Plus/Minus
Query 11435 AGAATTAATAAAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTT 11492
||||| |||||||||| ||| |||||||| | | |||||||| ||||||||||||
Sbjct 90 AGAATAAATAAAAAATAAAAAAATGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTT 31
Query 11493 ATTAGCACGACGCTCTRACCAACTGAGCTA 11522
|||||||||||||||| |||| ||||||||
Sbjct 30 ATTAGCACGACGCTCTAACCAGCTGAGCTA 1
>seq336979
Length=537
Score = 98.7 bits (108), Expect = 5e-16
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 11458 GCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTG 11517
||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| |||
Sbjct 537 GCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTG 478
Query 11518 AGCTAATGGGCCG 11530
||||||| |||||
Sbjct 477 AGCTAATAGGCCG 465
>seq463126
Length=3893
Score = 96.9 bits (106), Expect = 2e-15
Identities = 76/91 (84%), Gaps = 3/91 (3%)
Strand=Plus/Minus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
||| ||||| || |||||||| | | |||||||| ||||||||||||||||||||
Sbjct 2797 AATGAAAAAACA---TGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCAC 2741
Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCGT 11531
|||||||| |||| |||||||||| ||||||
Sbjct 2740 GACGCTCTAACCAGCTGAGCTAATAGGCCGT 2710
>seq443210
Length=495
Score = 96.9 bits (106), Expect = 2e-15
Identities = 72/84 (86%), Gaps = 2/84 (2%)
Strand=Plus/Minus
Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505
||||| ||||||||||| | | |||||||| |||||||||||||||||||||||||
Sbjct 236 AAAAT--AATTGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACGACGC 179
Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529
||| |||| |||||||||| ||||
Sbjct 178 TCTAACCAGCTGAGCTAATAGGCC 155
>seq321467
Length=693
Score = 96.9 bits (106), Expect = 2e-15
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
||||||||| | | |||||||| |||| |||||||||||||||||||||||| |||| |
Sbjct 426 TGGCCCATGCAGGTCTCGAACCTGCGACTTTCGCGTTATTAGCACGACGCTCTAACCAGC 485
Query 11516 TGAGCTAATGGGCCGTC 11532
||||||||| |||| ||
Sbjct 486 TGAGCTAATAGGCCATC 502
>seq191436
Length=371
Score = 96.9 bits (106), Expect = 2e-15
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| |
Sbjct 187 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 246
Query 11516 TGAGCTAATGGGCCG 11530
| ||||||| |||||
Sbjct 247 TCAGCTAATAGGCCG 261
>seq34776
Length=2575
Score = 96.9 bits (106), Expect = 2e-15
Identities = 86/105 (82%), Gaps = 5/105 (5%)
Strand=Plus/Minus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
|||| |||| ||||| |||||||| | | |||||||| |||||||||||||||||||
Sbjct 2307 AATAGAAAAACAAAT-GGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGC-- 2251
Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC-GTCGACGATTGTGAT 11544
||||||| |||| |||||||||| |||| || || | ||||||
Sbjct 2250 -ACGCTCTAACCAGCTGAGCTAATAGGCCAGTTGATGCCTGTGAT 2207
>seq23964
Length=2113
Score = 96.9 bits (106), Expect = 2e-15
Identities = 63/70 (90%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
|||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 2044 TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAG 2103
Query 11515 CTGAGCTAAT 11524
||||||||||
Sbjct 2104 CTGAGCTAAT 2113
>seq562234
Length=6266
Score = 95.1 bits (104), Expect = 6e-15
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||| | | |||||||| |||||||||||||||||||||||||||| ||||||
Sbjct 427 TGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 368
Query 11516 TGAGCTAATGGGCC 11529
||||||||| ||||
Sbjct 367 TGAGCTAATAGGCC 354
>seq502643
Length=772
Score = 95.1 bits (104), Expect = 6e-15
Identities = 72/85 (85%), Gaps = 2/85 (2%)
Strand=Plus/Plus
Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504
|||||| ||||||||||| | | |||| ||| ||||||||||||||||||||||||
Sbjct 527 AAAAAT--AATTGGCCCATACAGGTCTCGAGCCTGTGACCTTCGCGTTATTAGCACGACG 584
Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529
|||| |||| |||||||||| ||||
Sbjct 585 CTCTAACCAGCTGAGCTAATAGGCC 609
>seq581425
Length=896
Score = 93.3 bits (102), Expect = 2e-14
Identities = 81/100 (81%), Gaps = 1/100 (1%)
Strand=Plus/Plus
Query 11430 AATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGC 11489
||| ||||| |||||| | || ||||||||| | | |||||||| ||||||| |
Sbjct 490 AATTTAGAAA-AATAAACTAATAATGTGGCCCATGCAGGTCTCGAACCTGCGACCTTAAC 548
Query 11490 GTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||||||||||||||| |||| |||||||||| ||||
Sbjct 549 GTTATTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCC 588
>seq578873
Length=4205
Score = 93.3 bits (102), Expect = 2e-14
Identities = 81/100 (81%), Gaps = 1/100 (1%)
Strand=Plus/Plus
Query 11430 AATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGC 11489
||| ||||| |||||| | || ||||||||| | | |||||||| ||||||| |
Sbjct 879 AATTTAGAAA-AATAAACTAATAATGTGGCCCATGCAGGTCTCGAACCTGCGACCTTAAC 937
Query 11490 GTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||||||||||||||| |||| |||||||||| ||||
Sbjct 938 GTTATTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCC 977
>seq548071
Length=1057
Score = 93.3 bits (102), Expect = 2e-14
Identities = 81/100 (81%), Gaps = 1/100 (1%)
Strand=Plus/Plus
Query 11430 AATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGC 11489
||| ||||| |||||| | || ||||||||| | | |||||||| ||||||| |
Sbjct 842 AATTTAGAAA-AATAAACTAATAATGTGGCCCATGCAGGTCTCGAACCTGCGACCTTAAC 900
Query 11490 GTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||||||||||||||| |||| |||||||||| ||||
Sbjct 901 GTTATTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCC 940
>seq398516
Length=702
Score = 93.3 bits (102), Expect = 2e-14
Identities = 73/87 (84%), Gaps = 1/87 (1%)
Strand=Plus/Minus
Query 11444 AAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502
||| || |||| |||||||| | | |||||||| ||||||||||||||||||||||
Sbjct 87 AAACAAAAAAATATGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACGA 28
Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||| |||| |||||||||| ||||
Sbjct 27 CGCTCTAACCAGCTGAGCTAATAGGCC 1
>seq314920
Length=847
Score = 93.3 bits (102), Expect = 2e-14
Identities = 68/80 (85%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511
||| ||||| || | | |||||||| |||||||||||||||||||||||||||| ||
Sbjct 535 AAAGTGGCCTATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 594
Query 11512 CAACTGAGCTAATGGGCCGT 11531
|| |||||||||| ||||||
Sbjct 595 CAGCTGAGCTAATAGGCCGT 614
>seq163343
Length=402
Score = 93.3 bits (102), Expect = 2e-14
Identities = 81/100 (81%), Gaps = 1/100 (1%)
Strand=Plus/Plus
Query 11430 AATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGC 11489
||| ||||| |||||| | || || |||||| | | |||||| | ||||||||||
Sbjct 189 AATTTAGAAA-AATAAACTAATAATGTGACCCATGCAGGTCTCGAACATGCGACCTTCGC 247
Query 11490 GTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||||||||||||||| |||| |||||||||| ||||
Sbjct 248 GTTATTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCC 287
>seq62881
Length=12132
Score = 93.3 bits (102), Expect = 2e-14
Identities = 79/98 (81%), Gaps = 4/98 (4%)
Strand=Plus/Minus
Query 11431 ATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCG 11490
||| | |||||| | |||| ||||||||||||| |||||||| |||| ||||||
Sbjct 11934 ATAAAAAATTAAATATAAATAAAATTGGCCCATGTC----TCGAACCTGCGACGTTCGCG 11879
Query 11491 TTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGC 11528
|||||||||||||||||| | || |||||| ||| |||
Sbjct 11878 TTATTAGCACGACGCTCTAATCAGCTGAGCAAATAGGC 11841
>seq609404
Length=2475
Score = 91.5 bits (100), Expect = 8e-14
Identities = 75/90 (83%), Gaps = 3/90 (3%)
Strand=Plus/Minus
Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511
||| ||||||||| | |||||||| ||||||| ||||||||||||||||||||| ||
Sbjct 1104 AAAATGGCCCATGCG-GTCTCGAACCTGCGACCTTTGCGTTATTAGCACGACGCTCTAAC 1046
Query 11512 CAACTGAGCTAATGGGCC--GTCGACGATT 11539
|| |||||||||| |||| || ||| |||
Sbjct 1045 CAGCTGAGCTAATAGGCCATGTTGACAATT 1016
>seq577240
Length=3308
Score = 91.5 bits (100), Expect = 8e-14
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||| ||||||||||||||||||||||||||||| |||| |||||||||| ||||
Sbjct 3308 TCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCC 3250
>seq558705
Length=4021
Score = 91.5 bits (100), Expect = 8e-14
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||| | | |||||||| |||||||||||||||||||||||||||| |||| |
Sbjct 2150 TGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 2209
Query 11516 TGAGCTAATGGGCC 11529
||||||||| ||||
Sbjct 2210 TGAGCTAATAGGCC 2223
>seq534135
Length=2848
Score = 91.5 bits (100), Expect = 8e-14
Identities = 67/79 (85%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511
||| |||||||| | | |||||||| |||||||||||||||||||||||||||| ||
Sbjct 2439 AAAGTGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 2380
Query 11512 CAACTGAGCTAATGGGCCG 11530
| |||||||||| |||||
Sbjct 2379 TAGCTGAGCTAATAGGCCG 2361
>seq530077
Length=454
Score = 91.5 bits (100), Expect = 8e-14
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||| | | |||||||| |||||||||||||||||||||||||||| |||| |
Sbjct 187 TGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 128
Query 11516 TGAGCTAATGGGCC 11529
||||||||| ||||
Sbjct 127 TGAGCTAATAGGCC 114
>seq492356
Length=1632
Score = 91.5 bits (100), Expect = 8e-14
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||| ||||||||||||||||||||||||||||| |||| |||||||||| ||||
Sbjct 1627 TCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCC 1569
>seq461176
Length=3331
Score = 91.5 bits (100), Expect = 8e-14
Identities = 67/79 (85%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511
||| |||||||| | | |||||||| |||||||||||||||||||||||||||| ||
Sbjct 494 AAAGTGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 435
Query 11512 CAACTGAGCTAATGGGCCG 11530
| |||||||||| |||||
Sbjct 434 TAGCTGAGCTAATAGGCCG 416
>seq322604
Length=742
Score = 91.5 bits (100), Expect = 8e-14
Identities = 81/100 (81%), Gaps = 4/100 (4%)
Strand=Plus/Plus
Query 11428 GAAATAT--AGAA--TTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGAC 11483
||||||| |||| |||| || || ||| |||||||| | | |||||||| |||
Sbjct 643 GAAATATGTAGAAAGTTAAAAATTAAAAAAAGTGGCCCATACAGGTCTCGAACCTGTGAC 702
Query 11484 CTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAA 11523
||||||||||||||||||||||||| |||| |||||||||
Sbjct 703 CTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAA 742
>seq35078
Length=3248
Score = 91.5 bits (100), Expect = 8e-14
Identities = 75/90 (83%), Gaps = 3/90 (3%)
Strand=Plus/Plus
Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511
||| ||||||||| | |||||||| ||||||| ||||||||||||||||||||| ||
Sbjct 1043 AAAATGGCCCATGCG-GTCTCGAACCTGCGACCTTTGCGTTATTAGCACGACGCTCTAAC 1101
Query 11512 CAACTGAGCTAATGGGCC--GTCGACGATT 11539
|| |||||||||| |||| || ||| |||
Sbjct 1102 CAGCTGAGCTAATAGGCCATGTTGACAATT 1131
>seq441219
Length=987
Score = 89.7 bits (98), Expect = 3e-13
Identities = 81/102 (79%), Gaps = 3/102 (3%)
Strand=Plus/Plus
Query 11428 GAAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTC 11487
||||||| || | | ||||| || |||||||| | | |||||||| |||||||
Sbjct 788 GAAATATGTAAAAAGTTAAAAA---AAGTGGCCCATACAGGTCTCGAACCTGTGACCTTC 844
Query 11488 GCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||||||||||||||| |||| |||||||||| ||||
Sbjct 845 GCGTTATTAGCACGACGCTCAAACCAGCTGAGCTAATAGGCC 886
>seq358620
Length=1795
Score = 87.8 bits (96), Expect = 9e-13
Identities = 71/86 (83%), Gaps = 2/86 (2%)
Strand=Plus/Minus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
|||||| || |||||||| | | |||||||| ||| |||||||||||||||||||
Sbjct 964 AAAAAAAGAA--TGGCCCATACAGGTCTCGAACCTGTGACTTTCGCGTTATTAGCACGAC 907
Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529
||||| |||| |||||||||| ||||
Sbjct 906 GCTCTAACCAGCTGAGCTAATAGGCC 881
>seq551877
Length=346
Score = 86.0 bits (94), Expect = 3e-12
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||| |||||||||||||||||||||||||||| |||| |||||||||| ||||
Sbjct 181 TCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCC 123
>seq301982
Length=302
Score = 86.0 bits (94), Expect = 3e-12
Identities = 70/86 (81%), Gaps = 5/86 (6%)
Strand=Plus/Plus
Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504
|||||| ||| ||||||||| | | |||||||| || |||||||||||||||||
Sbjct 62 AAAAATAAAACTGGCCCATGCAGGTCTCGAACCTGCGG-----GCGTTATTAGCACGACG 116
Query 11505 CTCTRACCAACTGAGCTAATGGGCCG 11530
|||| |||| |||||||||| |||||
Sbjct 117 CTCTAACCAGCTGAGCTAATAGGCCG 142
>seq615233
Length=394
Score = 84.2 bits (92), Expect = 1e-11
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511
||| |||||||| | | |||||||| |||||||||||||||||||||||||||| ||
Sbjct 325 AAAGTGGCCCATACAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 384
Query 11512 CAACTGAGCT 11521
|| |||||||
Sbjct 385 CAGCTGAGCT 394
>seq171787
Length=392
Score = 84.2 bits (92), Expect = 1e-11
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand=Plus/Minus
Query 11475 ACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC-GTCG 11533
|||| ||||||||||||||||||||||||||||| |||| |||||||||| |||| | |
Sbjct 392 ACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCCACTTG 333
Query 11534 ACGATTGTGA 11543
| || |||||
Sbjct 332 ATGACTGTGA 323
Lambda K H
0.638 0.409 0.919
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 259496293931416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |