Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20x_20ananassa_20[genbank_20GCA_5F000511835.1_202013-12-06]
625,966 sequences; 697,762,269 total letters
Query= NC_006884.2
Length=178249
Score E
Sequences producing significant alignments: (Bits) Value
seq39735 197 2e-45
>seq39735
Length=4112
Score = 197 bits (218), Expect = 2e-45
Identities = 250/344 (73%), Gaps = 0/344 (0%)
Strand=Plus/Plus
Query 171056 TACTCAGCACCTGTATCTGCAGCATTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGT 171115
|| ||||| ||||| | || || ||| | ||| | | || ||| | ||||| ||
Sbjct 1640 TATTCAGCTCCTGTTGCAGCTGCTACTGCTATTTTCTTGATCTACCCAATTGGTCAAGGA 1699
Query 171116 TCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTCATGTTCGTGTTC 171175
|| ||||| |||||||| ||||| ||||| ||||| |||||||||||| | || |||
Sbjct 1700 AGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTC 1759
Query 171176 CAAGCAGAACACAACATACTAATGCACCCCTTCCATATGGCAGGTGTAGCAGGTATGTTC 171235
||||| || |||||||| || |||||||| || || ||| |||||| || ||| | ||
Sbjct 1760 CAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGGCTGGTGTATTT 1819
Query 171236 GGTGGTAGTCTCTTCAGTGCAATGCACGGTTCTCTAGTGACATCTTCTCTAATCAGAGAG 171295
|| ||| || |||||||| ||||| |||||| | || || ||| | | ||||| ||
Sbjct 1820 GGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAA 1879
Query 171296 ACAACTGAGAACGAGAGTCAAAACTACGGCTATAAGTTCGGACAAGAAGAAGAAACATAT 171355
|| || || || || | || | || || | ||||| ||||| |||||||| |||
Sbjct 1880 ACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTAT 1939
Query 171356 AACATTGTTGCTGCTCATGGATACTTCGGTAGATTAATCTTCCA 171399
|| || || || |||||||| || || || |||| ||||||||
Sbjct 1940 AATATCGTAGCCGCTCATGGTTAGTTTGGCCGATTGATCTTCCA 1983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565806689004240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |