Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20x_20ananassa_20[genbank_20GCA_5F000511835.1_202013-12-06]
625,966 sequences; 697,762,269 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq614569 131 1e-25
seq429140 123 2e-23
seq3688 116 2e-21
seq581596 113 3e-20
seq25161 111 1e-19
seq54869 105 4e-18
seq240458 104 2e-17
seq476667 102 5e-17
seq592805 98.7 7e-16
seq36855 96.9 2e-15
seq611018 93.3 3e-14
seq505050 93.3 3e-14
seq35568 89.7 3e-13
seq418407 87.8 1e-12
seq54597 87.8 1e-12
seq32509 87.8 1e-12
seq614642 82.4 5e-11
seq62158 82.4 5e-11
>seq614569
Length=4450
Score = 131 bits (144), Expect = 1e-25
Identities = 86/95 (91%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||| ||||||| || ||||||||
Sbjct 3482 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTGGATAGGGACAGTGGGAATCTCGT 3423
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||| ||||||||||||||||
Sbjct 3422 TAATCCATTCATGCGCGTGACTAATTAGATGACGA 3388
>seq429140
Length=2933
Score = 123 bits (136), Expect = 2e-23
Identities = 168/233 (72%), Gaps = 1/233 (0%)
Strand=Plus/Plus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| ||||| | || ||| | ||||| |||||||| |||||||| ||||||||||
Sbjct 37 CATT-CCACCACGCAGACGGAGCACCAGGTGAAGAGTAGATTCCTTTTGGATATTGTAAT 95
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
||| | || | || |||| || || ||||||||||| || | || ||||| |
Sbjct 96 CAGCAAGGGTGCGGCCATCCTCTAGCTGCTTGCCGGCAAATATGAGCCTCTGCTGATCTG 155
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
||||| ||| || |||||| || ||| ||| ||||| | || ||||| ||| |
Sbjct 156 GGGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTATCGATCGTATCAGAACTCT 215
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
|||| |||||||| || || || || || | || || || ||||||||||||
Sbjct 216 CAACCTCTAATGTGATGGTCTTCCCTGTGAGAGTCTTAACAAATATCTGCATG 268
>seq3688
Length=5219
Score = 116 bits (128), Expect = 2e-21
Identities = 72/77 (94%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 3798 CTCTCTCTTCAAAGTTCTTTTCACCTTTCCCTCACGGTACTTGTGTGCTATCGGTCTCGT 3857
Query 20007 GGTAATATTTAGCCTTA 20023
||| |||||||||||||
Sbjct 3858 GGTCATATTTAGCCTTA 3874
Score = 109 bits (120), Expect = 4e-19
Identities = 81/95 (85%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||| ||||||||||| ||| |||||||| ||||||||||||||| || | | | ||
Sbjct 1378 AAGTCCGTTCCCTTGCCTGCGGTTTCGCCAGATAGTAGATAGGGACAGTGGAAGTTTTGT 1437
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 1438 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1472
>seq581596
Length=910
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | | ||| | ||||||||| ||||| |||||| || || |||||||| |||
Sbjct 191 CCACCACGTAGACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGAC 250
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| | |||| || | || ||||| ||||| || || | || || || | ||
Sbjct 251 AGTGTCCTACCGTCCTCGAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGAA 310
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| ||||||||||||| ||| ||| ||| | ||| | | || ||| ||||| |||
Sbjct 311 ATGCCTTCTTTGTCCTGAATCTTTGCCTTGATATTATCAATTGTGTCTGAGCTTTCCACT 370
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || ||||||||||| || ||||| || ||||| || || |||||
Sbjct 371 TCCAAAGTAATAGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCAT 417
Score = 102 bits (112), Expect = 5e-17
Identities = 163/233 (70%), Gaps = 1/233 (0%)
Strand=Plus/Plus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| ||||| | | ||| | ||||| || || ||| ||| ||||| ||||||||||
Sbjct 643 CATT-CCACCACGAAGACGGAGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAAT 701
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
| | | ||| | || |||| ||||| |||||||| || || | || ||||| |
Sbjct 702 CTGCGAGCGTACGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTG 761
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
||||| ||| || |||||| ||| ||| ||| ||||| | || || || || |
Sbjct 762 GGGGGATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTATCGATTGTGTCAGAGCTCT 821
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
|||| || ||||| || || || || || | || || || || |||||||||
Sbjct 822 CAACCTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCATG 874
>seq25161
Length=2200
Score = 111 bits (122), Expect = 1e-19
Identities = 165/233 (71%), Gaps = 1/233 (0%)
Strand=Plus/Minus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| ||||| | || ||| | ||||| |||||||| ||||||||| ||||||||||
Sbjct 791 CATT-CCACCACGCAGACGGAGCACCAGGTGAAGAGTAGACTCCTTTTGGATATTGTAAT 733
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
| | | || | || |||| ||||| |||||||| || || | || ||||| |
Sbjct 732 CGGCAAGGGTGCGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTG 673
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
||| | ||| || |||||| || ||| ||| ||||| | || ||||| ||| |
Sbjct 672 GGGGTATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTATCGATTGTATCAGAACTCT 613
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
|||| || ||||| || || || || || | || || || || |||||||||
Sbjct 612 CAACCTCCAATGTGATGGTCTTCCCTGTGAGAGTCTTAACAAAGATCTGCATG 560
>seq54869
Length=20101
Score = 105 bits (116), Expect = 4e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | | |||||||||||| |||||||| ||||| ||||||||||| || |
Sbjct 3967 CCACCACGGAGACGCAACACCAAGTGAAGAGTTGATTCCTTCTGAATATTGTAGTCTGCA 3908
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| | || | || |||| ||||| || ||||| || || | || || || | ||
Sbjct 3907 AGAGTGCGACCATCCTCTAGCTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTCTGGAGGA 3848
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| ||| || |||||| ||| ||| ||| ||||| | | |||||| |||||||||
Sbjct 3847 ATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTATCAATTGTATCTGAACTTTCAACC 3788
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
|| || || || || || || || | ||| || || || || ||||||
Sbjct 3787 TCCAAGGTGATTGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCATG 3740
Score = 96.9 bits (106), Expect = 2e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | | |||||||||||| |||||||| ||||| ||||||||||| || |
Sbjct 4195 CCACCACGGAGACGCAACACCAAGTGAAGAGTTGATTCCTTCTGAATATTGTAGTCTGCA 4136
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| | || | || |||| ||||| || ||||| || || | || || || | ||
Sbjct 4135 AGAGTGCGACCATCCTCTAGCTGTTTCCCTGCAAAAATGAGCCTCTGCTGGTCTGGAGGA 4076
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| ||| || |||||| ||| ||| ||| ||||| | | ||||| ||| |||||
Sbjct 4075 ATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTGTCAATTGTATCAGAACTCTCAACC 4016
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
|| || || || || || || || | ||| || || || || ||||||
Sbjct 4015 TCCAAGGTGATTGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCATG 3968
>seq240458
Length=333
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| |
Sbjct 68 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 127
Query 20007 GGTAATATTTAGCCTTA 20023
||||||||||||||
Sbjct 128 CCCAATATTTAGCCTTA 144
>seq476667
Length=529
Score = 102 bits (112), Expect = 5e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161
||| | ||||||||| ||||| |||||| || || |||||||| | || | |
Sbjct 520 ACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGCCAGTGTCCTACC 461
Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221
|| || | || ||||| ||||| || || | || || || | ||| | |||||||||
Sbjct 460 ATCCTCGAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTT 401
Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281
|||| || || ||| ||||| | | || ||| ||||| ||||| || |||||
Sbjct 400 GTCCTGAACCTTCGCCTTGACATTATCAATTGTGTCTGAGCTTTCCACTTCCAAAGTAAT 341
Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||||| || ||||| || ||||| || || |||||
Sbjct 340 AGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCAT 305
Score = 86.0 bits (94), Expect = 4e-12
Identities = 159/232 (69%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| ||||| | || ||| | ||||| || | || ||||||||||| ||||| |
Sbjct 307 CATT-CCACCACGCAGACGGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGT 249
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
| | | | | | |||| || || ||||| || ||||| || || | || ||||| |
Sbjct 248 CTGCAAGAGTTCTTCCGTCCTCCAACTGTTTACCTGCAAAGATGAGCCTCTGCTGATCTG 189
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
||| | || || |||||| || ||| || ||||| | | ||||| ||||
Sbjct 188 GGGGAATACCCTCCTTGTCCTGGATCTTTGCTTTAACATTGTCAATTGTATCAGAGCTTT 129
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || || ||||| || ||||| || |||| ||| ||||| || || |||||
Sbjct 128 CCACCTCCAATGTGATTGTTTTCCCAGTCAGGGTCTTCACAAAGATTTGCAT 77
>seq592805
Length=13616
Score = 98.7 bits (108), Expect = 7e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | ||| | ||||||||| || || |||||| ||||| ||||||||||
Sbjct 290 TACCACCGCGAAGACGGAGCACCAAATGGAGGGTTGACTCCTTCTGAATGTTGTAATCAG 231
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| | |||| || | || |||||||| || || | | || ||||| | ||
Sbjct 230 CCAAGGTCCTACCGTCCTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGGG 171
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||| |||||| || || ||||| || | || ||||| || || |
Sbjct 170 GGATCCCTTCCTTGTCCTGGATCTTAGCTTTCACGTTGTCGATGGTATCAGAGCTCTCGA 111
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | || || || || || || | |||||||||||| ||||||||
Sbjct 110 CCTCGAGAGTGATCGTCTTTCCGGTTAGGGTTTTCACGAAGATCTGCAT 62
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||| | | ||| | ||||| ||||| ||| |||||| || |||||||||||||
Sbjct 973 ACCACCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATATTGTAATCAGC 914
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|| ||| | || || | || || || ||||| || | | || || || | ||
Sbjct 913 CAGGGTACGACCATCCTCGAGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGG 854
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
|| ||||| || ||| ||| || || ||||| | || ||||| ||| || ||
Sbjct 853 GATACCTTCCTTATCCTGAATCTTGGCTTTGACATTATCGATGGTATCCGAACTCTCCAC 794
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || || || || || || ||||| || ||||| || ||||||||
Sbjct 793 CTCCAAAGTGATGGTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCAT 746
>seq36855
Length=2596
Score = 96.9 bits (106), Expect = 2e-15
Identities = 162/233 (70%), Gaps = 1/233 (0%)
Strand=Plus/Plus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| ||||| | | ||| | ||||| || || ||| ||| ||||| ||||||||||
Sbjct 229 CATT-CCACCACGAAGACGGAGCACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAAT 287
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
| | ||| | || |||| ||||| |||||||| || || | || ||||| |
Sbjct 288 CTGCGCGCGTACGGCCATCCTCTAGCTGTTTGCCGGCAAAGATGAGCCTCTGCTGATCTG 347
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
||||| ||| || |||||| ||| ||| ||| ||||| | || || || || |
Sbjct 348 GGGGGATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTATCGATTGTGTCAGAGCTCT 407
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
|||| || ||||||| || || || || | || || || || |||||||||
Sbjct 408 CAACCTCCAATGTAACGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCATG 460
>seq611018
Length=2696
Score = 93.3 bits (102), Expect = 3e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| |
Sbjct 1729 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 1788
Query 20007 GGTAATATTTAGCCTT 20022
| |||||||||||
Sbjct 1789 GCCTGTATTTAGCCTT 1804
>seq505050
Length=538
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | || ||| | ||||||||| |||| |||||| || |||||||| || |
Sbjct 204 TACCACCACGCAGACGAAGCACCAAATGGAGAGAAGACTCCTTCTGGATATTGTAGTCTG 263
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| || | || || | || || |||||||| || || | || || || | ||
Sbjct 264 CTAGGGTGCGGCCATCCTCAAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTCAGGGG 323
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| |||||| |||||| ||| || ||| ||||| | | || || || || |
Sbjct 324 GGATGCCTTCCTTGTCCTGAATCTTAGCCTTGACATTGTCAATGGTGTCAGAGCTCTCGA 383
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | || || || || ||||||||||| || ||||| ||||||||
Sbjct 384 CCTCAAGGGTGATGGTCTTTCCCGTCAAGGTCTTGACGAAGATCTGCAT 432
>seq35568
Length=7068
Score = 89.7 bits (98), Expect = 3e-13
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | || ||| | |||||| || |||||| ||||||||||||||| || ||||
Sbjct 3433 TACCACCGCGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATATTATAGTCAG 3492
Query 38149 ACAAAACACGTT-CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207
||| | || | || || | || || || ||||| || | | || || || | |
Sbjct 3493 -CAAGTGTCCTTCCATCCTCAAGCTGCTTACCTGCAAAAATCAACCTCTGCTGGTCTGGG 3551
Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267
|| | || || |||||| |||||| |||||||| | | || || |||||
Sbjct 3552 GGAATACCCTCCTTGTCCTGAATTTTAGCTTTCACATTATCAATGGTGTCAGAGCTTTCC 3611
Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
||||| || || || ||||| || || | ||| || || || || ||||||
Sbjct 3612 ACTTCCAAAGTGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATTTGCATG 3662
>seq418407
Length=782
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | || ||| | || |||||||| ||| |||||||||||| |||||||||| |
Sbjct 715 CCACCACGCAGACGAAGAACTAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCC 656
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| | | || || | || || || ||||| || || | || || || | |||
Sbjct 655 AGGGTGTGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGG 596
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| || ||||| ||| ||| ||| |||||| || | | || || ||| |||||
Sbjct 595 ATACCCTCTTTATCCTGAATCTTTGCCTTCACGTTGTCAATGGTGTCAGAACTCTCAACC 536
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
|| || || || ||||| || || | || ||||| || || ||||||
Sbjct 535 TCCAAGGTTATGGTTTTCCCAGTGAGAGTCTTCACAAAGATTTGCATG 488
>seq54597
Length=20763
Score = 87.8 bits (96), Expect = 1e-12
Identities = 137/195 (70%), Gaps = 1/195 (1%)
Strand=Plus/Plus
Query 38128 CCTTT-TGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186
||||| || || ||||| || | ||| || |||| || | || |||||||| ||
Sbjct 12912 CCTTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAG 12971
Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246
|| || || || ||||| | |||| |||||| ||||| || || ||| |||||
Sbjct 12972 ATGAGACGCTGCTGATCAGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTG 13031
Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306
| || || || | || || || || | || || || || ||||| | ||||||||||
Sbjct 13032 TCGATGGTGTCGCTGCTCTCCACCTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACG 13091
Query 38307 AATATCTGCATGTTT 38321
||||||||||| |||
Sbjct 13092 AATATCTGCATCTTT 13106
>seq32509
Length=4583
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | | |||||||||||| |||||||| ||||| ||||||||||| || |
Sbjct 1666 CCACCACGGAGACGCAACACCAAGTGAAGAGTTGATTCCTTCTGAATATTGTAGTCCGCA 1725
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| | || | || |||| ||||| || ||||| || || || || | ||
Sbjct 1726 AGAGTGCGACCATCCTCTAGCTGTTTGCCTGCAAAAATGAGCTTCTGCTGGGGTGGAGGA 1785
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| ||| || |||||| ||| ||| ||| ||||| | | |||||| |||||||||
Sbjct 1786 ATGCCCTCCTTGTCCTGAATCTTTGCCTTGACATTATCAATTGTATCTGAACTTTCAACC 1845
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
|| || | || || || || || | ||| || || || || ||||||
Sbjct 1846 TCCAAGGCGATTGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCATG 1893
>seq614642
Length=11660
Score = 82.4 bits (90), Expect = 5e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 38108 CACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTC 38167
||||| || ||||| |||||| || || ||||| || | | | || |||| ||
Sbjct 8396 CACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTCCGGCCGTCCTC 8455
Query 38168 TAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCAT 38227
| ||||||||||| || || ||||| || || || | |||| ||| || |||||
Sbjct 8456 GAGCTGTTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTG 8515
Query 38228 AATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTT 38287
|| || ||||||||| | || || || || || || || || || || ||
Sbjct 8516 GATCTTGGCCTTCACATTATCGATGGTGTCGGAGGACTCCACCTCCAACGTGATCGTCTT 8575
Query 38288 ACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
||||| | |||||||||||| |||||||| ||
Sbjct 8576 CCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 8608
>seq62158
Length=5977
Score = 82.4 bits (90), Expect = 5e-11
Identities = 136/195 (70%), Gaps = 1/195 (1%)
Strand=Plus/Plus
Query 38128 CCTTT-TGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186
||||| || || ||||| || | ||| || |||| || | || |||||||| ||
Sbjct 747 CCTTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAG 806
Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246
|| || || || ||||| | |||| |||||| ||||| || || ||| |||||
Sbjct 807 ATGAGACGCTGCTGATCAGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTG 866
Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306
| || || || | || || || || | || || || || ||||| | ||||||||||
Sbjct 867 TCGATGGTGTCGCTGCTCTCCACCTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACG 926
Query 38307 AATATCTGCATGTTT 38321
|| |||||||| |||
Sbjct 927 AAAATCTGCATCTTT 941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 332391900999746
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |