Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20x_20ananassa_20[genbank_20GCA_5F000511835.1_202013-12-06]
625,966 sequences; 697,762,269 total letters
Query= NC_015281.1
Length=179563
Score E
Sequences producing significant alignments: (Bits) Value
seq39735 217 2e-51
>seq39735
Length=4112
Score = 217 bits (240), Expect = 2e-51
Identities = 255/345 (74%), Gaps = 0/345 (0%)
Strand=Plus/Plus
Query 168253 TACTCTGCACCAGTCGCTGCAGCGAGTGCAGTATTCCTAGTGTATCCTTTCGGTCAAGGT 168312
|| || || || || || || || | ||| | ||| | | || || | ||||||||
Sbjct 1640 TATTCAGCTCCTGTTGCAGCTGCTACTGCTATTTTCTTGATCTACCCAATTGGTCAAGGA 1699
Query 168313 AGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACATGTTGGTCTTC 168372
|| || ||||| | ||||| || |||||||| || || ||||||| |||| | || |||
Sbjct 1700 AGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTC 1759
Query 168373 CAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCTGGGGTATTT 168432
|||||||||||||| || || ||||| || || || ||||| || || ||||| ||||||
Sbjct 1760 CAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGGCTGGTGTATTT 1819
Query 168433 GGTGGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTCGTTAGAGAG 168492
|| || | || ||||||||||| || |||||| || ||| | | | || ||
Sbjct 1820 GGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAA 1879
Query 168493 ACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAAACATAC 168552
|| || |||| ||||| || | ||||||| ||||| ||||| |||||||| ||
Sbjct 1880 ACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTAT 1939
Query 168553 AACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAA 168597
|| |||||||||||||||||||| || || || ||||||||||||
Sbjct 1940 AATATCGTAGCCGCTCATGGTTAGTTTGGCCGATTGATCTTCCAA 1984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569978588231280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |