Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20x_20ananassa_20[genbank_20GCA_5F000511835.1_202013-12-06]
625,966 sequences; 697,762,269 total letters
Query= NC_023584.1
Length=170438
Score E
Sequences producing significant alignments: (Bits) Value
seq32757 192 6e-44
seq39735 188 8e-43
>seq32757
Length=9777
Score = 192 bits (212), Expect = 6e-44
Identities = 238/326 (73%), Gaps = 0/326 (0%)
Strand=Plus/Plus
Query 157144 TTCATTGTTGCATTCGTAGCAGCACCTCCCGTTGATATCGACGGTATTCGCGAACCAGTT 157203
|| ||| |||| ||| | || |||||||| || ||||| || |||||||| ||||| |||
Sbjct 3701 TTTATTATTGCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTATTCGTGAACCTGTT 3760
Query 157204 GCTGGTTCTCTCATGTATGGCAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCAAAC 157263
|||| ||| | | || || ||||| || || || ||||| || | ||| ||||
Sbjct 3761 TCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTATCCCTACTTCTGCA 3820
Query 157264 GCAATCGGTCTTCACTTCTACCCCATCTGGGAAGCAGCATCACTTGATGAGTGGCTTTAC 157323
|| || ||| | ||||| ||||| || |||||||| || || ||||||| ||| | |||
Sbjct 3821 GCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCTTCTGTTGATGAATGGTTATAC 3880
Query 157324 AACGGTGGTCCTTTCCAACTGGTAGTCTTTCACTTCCTGATCGGCATCTATGCCTATATG 157383
|||||||| |||| | || | || | |||||| | | || | | |||||||
Sbjct 3881 AACGGTGGCCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTATATG 3940
Query 157384 GGACGTGAGTGGGAACTTTCTTACCGTTTAGGTATGCGCCCCTGGATCTGTGTTGCCTAC 157443
|| ||||||||||||||| || |||| | ||||||||||| ||||| |||||| ||
Sbjct 3941 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATAT 4000
Query 157444 TCGGCACCAGTCGCTGCTGCGAGTGC 157469
|| || || || || ||||| | |||
Sbjct 4001 TCAGCTCCTGTTGCAGCTGCTACTGC 4026
>seq39735
Length=4112
Score = 188 bits (208), Expect = 8e-43
Identities = 251/346 (73%), Gaps = 2/346 (1%)
Strand=Plus/Plus
Query 157441 TACTCGGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCAAGGT 157500
|| || || || || || ||||| | ||| | ||| | |||| || | ||||||||
Sbjct 1640 TATTCAGCTCCTGTTGCAGCTGCTACTGCTATTTTCTTGATCTACCCAATTGGTCAAGGA 1699
Query 157501 TCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGCTCGTCTTC 157560
|| || || | ||||||||| || |||||||||||||| |||| ||| | || |||
Sbjct 1700 AGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTC 1759
Query 157561 CAGGCAGAGCACAATATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGTATTC 157620
|| || |||||||| || |||||||| || || |||||||| || || ||||| |||||
Sbjct 1760 CAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGGCTGGTGTATTT 1819
Query 157621 GGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCGCTTGTTC-GTGA 157679
|| || || | ||| ||||||||| || | | || || | || | ||| || | ||
Sbjct 1820 GGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCT-CTAGTTTGATCAGGGA 1878
Query 157680 AACAACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACGTA 157739
||| || |||| || || || | ||||||| ||||||||||| ||||| || ||
Sbjct 1879 AACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTA 1938
Query 157740 CAACATCGTTGCTGCACACGGTTACTTCGGTCGCCTGATCTTCCAA 157785
|| ||||| || || || ||||| || || || |||||||||||
Sbjct 1939 TAATATCGTAGCCGCTCATGGTTAGTTTGGCCGATTGATCTTCCAA 1984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 541007065821280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |