Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20x_20ananassa_20[genbank_20GCA_5F000511835.1_202013-12-06]
625,966 sequences; 697,762,269 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq581596 98.7 1e-15
seq476667 89.7 5e-13
>seq581596
Length=910
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| || |||| ||| | || ||||| | || || || || |||||||||||||| |
Sbjct 191 CCACCACGTAGACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGAC 250
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| ||| || ||| ||||| || || || ||| |||| || | ||||| || || |
Sbjct 251 AGTGTCCTACCGTCCTCGAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGAA 310
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|||||||||||||| ||| ||| || | | || | ||||||| | ||| |||
Sbjct 311 ATGCCTTCTTTGTCCTGAATCTTTGCCTTGATATTATCAATTGTGTCTGAGCTTTCCACT 370
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| | ||| | || || || ||||| || || || || ||||||||
Sbjct 371 TCCAAAGTAATAGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCAT 417
>seq476667
Length=529
Score = 89.7 bits (98), Expect = 5e-13
Identities = 154/224 (69%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 137188 CCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATT 137247
|| |||| ||| | || ||||| | || || || || |||||||||||||| || |
Sbjct 528 CCACGTAGACGGAGCACCAAATGCAGAGTTGACTCCTTCTGTATGTTGTAATCTGCCAGT 469
Query 137248 GTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATG 137307
|| || || ||||| || || || ||| |||| || | ||||| || || || |||
Sbjct 468 GTCCTACCATCCTCGAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATG 409
Query 137308 CCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCA 137367
||||||||||| || || || | | || | ||||||| | ||| |||||
Sbjct 408 CCTTCTTTGTCCTGAACCTTCGCCTTGACATTATCAATTGTGTCTGAGCTTTCCACTTCC 349
Query 137368 ACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
| ||| | || || || ||||| || || || || ||||||||
Sbjct 348 AAAGTAATAGTTTTCCCTGTCAAAGTCTTCACAAAGATTTGCAT 305
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 484721350831200
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |