Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20x_20ananassa_20[genbank_20GCA_5F000511835.1_202013-12-06]
625,966 sequences; 697,762,269 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq442060 91.5 2e-13
seq583926 87.8 2e-12
seq435098 87.8 2e-12
seq558064 86.0 7e-12
seq516263 86.0 7e-12
seq51387 86.0 7e-12
seq349392 82.4 8e-11
>seq442060
Length=1752
Score = 91.5 bits (100), Expect = 2e-13
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand=Plus/Minus
Query 79624 CTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAA 79682
|||||||| |||| |||| |||| ||||||||||||||||||||||||||| |||||
Sbjct 1752 CTGCTTTCACTGAGAGTTGAACTCAGGACCTCCCGCTTACTAAACGGGTGCTCTAACCAA 1693
Query 79683 TTGAGCTACGAAAGCAA 79699
||||||| ||||||||
Sbjct 1692 CTGAGCTATGAAAGCAA 1676
>seq583926
Length=620
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/75 (87%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 79624 CTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAA 79682
|||||||| |||| |||| |||| ||||||||||||||||||||||||||| |||||
Sbjct 316 CTGCTTTCACTGAGAGTTGAACTCAGGACCTCCCGCTTACTAAACGGGTGCTCTAACCAA 257
Query 79683 TTGAGCTACGAAAGC 79697
||||||| ||||||
Sbjct 256 CTGAGCTATGAAAGC 242
>seq435098
Length=649
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/75 (87%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 79624 CTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAA 79682
|||||||| |||| |||| |||| ||||||||||||||||||||||||||| |||||
Sbjct 401 CTGCTTTCACTGAGAGTTGAACTCAGGACCTCCCGCTTACTAAACGGGTGCTCTAACCAA 460
Query 79683 TTGAGCTACGAAAGC 79697
||||||| ||||||
Sbjct 461 CTGAGCTATGAAAGC 475
>seq558064
Length=1258
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683
|||| ||| |||| |||| |||| ||||||||||||||||||||||||||| |||||
Sbjct 1164 TGCTCTCGTTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 1105
Query 79684 TGAGCTACGAAAGC 79697
|||||||||| |||
Sbjct 1104 TGAGCTACGAGAGC 1091
>seq516263
Length=4349
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683
||||||| |||| |||| |||| ||||||||||||||||||||||||||| |||||
Sbjct 426 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 367
Query 79684 TGAGCTACGAAAGC 79697
||||||| ||||||
Sbjct 366 TGAGCTATGAAAGC 353
>seq51387
Length=7531
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683
|||| ||| |||| |||| |||| ||||||||||||||||||||||||||| |||||
Sbjct 4919 TGCTCTCGTTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 4978
Query 79684 TGAGCTACGAAAGC 79697
|||||||||| |||
Sbjct 4979 TGAGCTACGAGAGC 4992
>seq349392
Length=1751
Score = 82.4 bits (90), Expect = 8e-11
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 79624 CTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAA 79682
||||| ||| |||| | ||||||| |||||||| |||||||||||||||||| |||||
Sbjct 1536 CTGCTCTCGTTGAGAGTCGATCTCAAGACCTCCCGATTACTAAACGGGTGCTCTAACCAA 1595
Query 79683 TTGAGCTACGAAAGC 79697
|||||||||| |||
Sbjct 1596 CTGAGCTACGAGAGC 1610
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542934267366800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |