Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20x_20ananassa_20[genbank_20GCA_5F000511835.1_202013-12-06] 625,966 sequences; 697,762,269 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq587754 100 4e-16 >seq587754 Length=890 Score = 100 bits (110), Expect = 4e-16 Identities = 127/172 (74%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 77897 CTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCC 77956 |||||||||||| |||| |||||| |||||||| || ||||| || |||| || Sbjct 483 CTCTCTTTCATAACGAGTGTATAGCTCTTCAAATTTTTCACCCCAGCAGTCTGCCAACCC 424 Query 77957 AGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTT-AACTCGTTTCATAA 78015 || | ||||| || || | |||||||| || |||| | | || ||||| |||||| | Sbjct 423 TGGAGACTCATTAGGACAAAATAATGACCAATCTCCAT-TGCTTTCAACTCTTTTCATGA 365 Query 78016 AGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTC 78067 | |||||||| | ||| |||||| ||| ||||| || | ||| | ||||| Sbjct 364 ACAGATCAGGCACCCAAAGAGCATAAAAAAGATCACGAGCTCTGTTCTCTTC 313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 689233311874240