Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq425 95.1 9e-15 seq170 86.0 5e-12 >seq425 Length=258412 Score = 95.1 bits (104), Expect = 9e-15 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||||| || || | | ||| |||||||||||||||||||| | Sbjct 251476 ACATGAGCAATCATGCATGTCAACAAGGCATACGATGCAATGTTAAATGGCACTCCAAGA 251535 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGA 101850 |||||||||||||| | |||||||| |||||| || Sbjct 251536 CCCATATCAGCTGAGCGTTGATACATTTGACAAGA 251570 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||||| || || | | ||| |||||||||||||| ||||| | Sbjct 237439 ACATGAGCAATCATGCATGTCAACAAGGCATACGATGCAATGTTAAATGGAACTCCAAGA 237380 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAAT 101875 ||||| |||||||| | |||||||| |||||| || | || |||| |||||||| Sbjct 237379 CCCATGTCAGCTGAGCGTTGATACATTTGACAAGATAACTCCCCATTGGCCACATAAAAC 237320 Query 101876 TG 101877 || Sbjct 237319 TG 237318 >seq170 Length=341306 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||||| || || |||| ||| || |||||||| ||||| || | Sbjct 142882 ACATGAGCAATCATGCATGTCAATAGAGCATATGATGCGATGTTAAAAGGCACCCCAAGA 142941 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAAT 101875 ||||||||||| || | ||||||| ||||| || |||| |||| |||||||| Sbjct 142942 CCCATATCAGCCGAGCACTGATACATCTGACACGATAGCTCGCCATTGGCTACATAAAAC 143001 Query 101876 TG 101877 || Sbjct 143002 TG 143003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360857087923265