Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq224 87.8 3e-12 >seq224 Length=186114 Score = 87.8 bits (96), Expect = 3e-12 Identities = 107/145 (74%), Gaps = 1/145 (1%) Strand=Plus/Minus Query 189597 TAGACGGCACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACG 189656 ||||||||| |||||| || || || || || || |||||||| || || ||| | || | Sbjct 135176 TAGACGGCAGGGATCCAAATGGTTATGTTGGGTGCATGTGGTCAATATGTGGAGTGCATG 135117 Query 189657 ATAGAGCGTGGAAAGAAAGACC-GATATTTGGAAAGATAAGATATATGAATTATGAGAGT 189715 | | ||||| ||| |||| | | |||||||| |||||||| ||||| | || | Sbjct 135116 ACCAGGGGTGGAGAGAGCGACCAGTTTTTTGGAAAAATAAGATACATGAACTTTGCTGGG 135057 Query 189716 TCTAAGAAGAAATTTGATGTTGCTG 189740 | |||| ||||||||||||| || Sbjct 135056 TGCAAGAGAAAATTTGATGTTGATG 135032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922163800480600