Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_002484.2 Length=56426 Score E Sequences producing significant alignments: (Bits) Value seq79949 95.1 4e-15 >seq79949 Length=1573 Score = 95.1 bits (104), Expect = 4e-15 Identities = 118/158 (75%), Gaps = 4/158 (3%) Strand=Plus/Plus Query 48904 TCGCGCCAGATGAAGCTGTTGGCCAGGGAGATCGGATGCCCGGTGCTCCCGCTCTGCCAG 48963 |||||| | || ||||| | |||| |||| ||| ||||| || | || || ||||| Sbjct 286 TCGCGCAACATCAAGCTCCTCGCCAAGGAGCTCGAGTGCCCCGTCGTGGCGATCAGCCAG 345 Query 48964 CTCAACCGCGGATGTGAGTCTCGCCCGGATAAG-CGCC-CGGTGCTCAGCGACCTACGCG 49021 || ||||| |||| ||| ||| | || ||| |||| | | ||||| |||| |||| Sbjct 346 CTGAACCGTGGATCCGAGCAGCGCACCGACAAGACGCCGCAGATCTCAG--ACCTGCGCG 403 Query 49022 AGTCCGGCGCCATCGAGCAAGACGCGGACATCGTGATG 49059 |||||||| | |||||||| ||||| ||||||||| || Sbjct 404 AGTCCGGCTCGATCGAGCAGGACGCCGACATCGTGCTG 441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180249792270840