Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq6003 100 6e-16 >seq6003 Length=93342 Score = 100 bits (110), Expect = 6e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 248805 CAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAA 248864 || ||| || || || |||||||||| ||| ||||| || |||| |||||||||| | || Sbjct 81310 CAGAGACTTTGATTATGATTTCTTTGGTTTTAAAACTCTTGAGAGATCGTATCTCTTAAA 81251 Query 248865 AATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGAT 248924 || || ||| | || ||| | ||| |||||||||||| | || |||| ||||| Sbjct 81250 GATCAGAGGGAAGGTTGTTGAAAGGCCTCAACACATGTTGATGAGGGTTTCTGTTGGGAT 81191 Query 248925 TCACAAGGATGACATAGA 248942 ||||||||||| ||||| Sbjct 81190 CCACAAGGATGATATAGA 81173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1072534885571520