Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq3095 84.2 4e-11 >seq3095 Length=123113 Score = 84.2 bits (92), Expect = 4e-11 Identities = 119/165 (72%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 101516 TGGGAAATGTACAAAAAAGAGGTTGCCTGTTTTTGGACATTGGAAGAGATTGATTTCGAA 101575 |||||||||||||| || | | |||| |||||||| ||||||| ||||||| Sbjct 111038 TGGGAAATGTACAAGAAGGCAGAGGCCTCGTTTTGGACGGCGGAAGAGGTTGATTTGTCC 111097 Query 101576 AGGGATCCTAAAG-ATTGGGAGAAACTCACTCAAGATGAGAAGGATTTCATTCTCCAGAT 101634 |||| || || | ||||| ||| | || | ||||||||| |||||||| || | Sbjct 111098 CAGGAT-GTACAGCACTGGGATAAATTGACCGAGGATGAGAAGCATTTCATTAAGCATGT 111156 Query 101635 TCTGGCGTTCTTTGCATCCTCTGACGGAATTGTAATTGAAAATCT 101679 ||| || || ||||| |||| ||||| ||||| | || ||||| Sbjct 111157 TCTTGCCTTTTTTGCCGCCTCCGACGGCATTGTTTTGGAGAATCT 111201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988449035286825