Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_004688.1 Length=110865 Score E Sequences producing significant alignments: (Bits) Value seq15399 172 4e-38 >seq15399 Length=996 Score = 172 bits (190), Expect = 4e-38 Identities = 249/349 (71%), Gaps = 3/349 (1%) Strand=Plus/Plus Query 99216 CTCGATCTCCCCATCGGAGACGAACGCGCCCTGTATCCGGATGGCGCTGCGCGCCCCCAC 99275 || |||||| | |||| ||| | |||||||| || || ||||| || | |||| Sbjct 429 CTGGATCTCGGCCTCGGTGACCCATGCGCCCTGCATGCGCATGGCCTTGTTCTGGCCCAT 488 Query 99276 TGGCAGAAATAACCCGTCACCCATTCCCATGAGTTGCTCGGCTCCGCCCTCGTCCAGGAT 99335 ||||| || | ||||||||| || | ||| | |||||| ||| || ||| ||||| Sbjct 489 CGGCAGGAACAGTCCGTCACCCTGGCCGACGAGCTTCTCGGCGCCGGGCTGGTCGAGGAT 548 Query 99336 CACCCGGCTATCGGTGAGGGACGCTGTGGCGAACGACAGCCGCGAGGGCACGTTGCTCTT 99395 || ||||| |||| || |||| || | ||||| ||| || ||||||||| ||| Sbjct 549 GACGCGGCTGTCGGCCAGCGACGACGTCGGGAACGCCAGGCGGCTCGGCACGTTGGCCTT 608 Query 99396 GATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATGCC 99455 ||| || |||||||| || || ||||| || ||||||||||| |||| || || ||||| Sbjct 609 GATCAGACCCGTCACGACGTCGACGGACGGTCGCTGCGTCGCGAGGATCAGGTGGATGCC 668 Query 99456 GGCCGCACGCGCCTTCTGCGCGATGCGGACAATGTTGGCCTCAACCTCTTTCTTGTAGCC 99515 ||| || || || ||| | ||| ||||| ||| |||| || || || || || | Sbjct 669 GGCGGCTCGGGCGAGCTGAGTGATACGGACGATGGAATCCTCGACATC--TCGTGGAG-C 725 Query 99516 ACCCATCATGAGATCAGCGAGTTCATCCACCACTACCACGATGTAGGGG 99564 | ||||||| || || ||||| || || || || |||| | ||| ||| Sbjct 726 AACCATCATCAGGTCGGCGAGCTCGTCGACGACCACCAGCAGGTACGGG 774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354256297013790