Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq10374 95.1 1e-14 seq7954 95.1 1e-14 seq1123 86.0 6e-12 >seq10374 Length=62593 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | ||||| || || | || || || | || || | || ||||| Sbjct 57861 AATGCAAATCTTTGTTAAGACTCTCACCGGTAAGACCATTACTCTTGAGGTAGAAAGCTC 57920 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||||||| || | || || ||||| || || |||||||| ||||| || || Sbjct 57921 CGACACCATTGACAACGTTAAGGCCAAGATCCAGGATAAGGAAGGGATCCCTCCGGACCA 57980 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATA 26946 ||||| || |||| || ||| |||||||||||||||| | || | || ||||| | Sbjct 57981 GCAAAGGCTGATTTTCGCCGGTAAACAACTCGAAGATGGCCG-TACTTTGGCTGACTACA 58039 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||| || || || || | ||| ||||||| || || || ||||| Sbjct 58040 ACATTCAGAAGGAGTCCACCCTTCATTTGGTCCTCAGGCTGAGGGGAGG 58088 >seq7954 Length=38498 Score = 95.1 bits (104), Expect = 1e-14 Identities = 124/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||| || || | || ||| ||||||| ||||||||||| || || || || || Sbjct 10981 CGACACGATTGATAATGTAAAAGCAAAGATTCAGGACAAAGAAGGAATTCCACCGGACCA 10922 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATA 26946 ||| || | || | || ||| || || ||||| |||| | | | ||| || ||||||| Sbjct 10921 GCAACGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGTA-CGTTGGCAGACTATA 10863 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||| ||||| || || ||| |||| |||||||| | ||| | ||||| Sbjct 10862 ACATCCAAAAGGAGTCAACTCTCCACCTGGTCCTCCGTCTTCGTGGAGG 10814 >seq1123 Length=183110 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| |||||||||| | |||||| | || | ||| Sbjct 67429 ATGCAAATCTTCGTCAAAACCCTAACTGGAAAGACCATCACCCTAGAGGTGGAAAGTTCT 67488 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | || ||| ||||| ||||||||||| || || || || ||| Sbjct 67489 GATACCATTGACAATGTAAAAGCCAAGATCCAAGACAAAGAAGGAATTCCACCAGACCAA 67548 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||||| || || | | || || ||||||||||||| | ||| | | || |||||| Sbjct 67549 CAAAGGCTGATCTTTGCTGGAAAGCAACTCGAAGATGGTCGAACCCTTGCTGATTATAAC 67608 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || || || || || |||| |||| || Sbjct 67609 ATACAGAAGGAGTCCACCCTCCACTTGGTTCT 67640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478126806690800