Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq1123 89.7 4e-13 >seq1123 Length=183110 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| || |||||||| | || || || ||||| ||| | || |||| Sbjct 67429 ATGCAAATCTTCGTCAAAACCCTAACTGGAAAGACCATCACCCTAGAGGTGGAAAGTTCT 67488 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | | |||||| || || ||||||||||| |||| || ||| Sbjct 67489 GATACCATTGACAATGTAAAAGCCAAGATCCAAGACAAAGAAGGAATTCCACCAGACCAA 67548 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 |||||||| || | ||| || || ||| | |||||| | ||| | || |||||||| Sbjct 67549 CAAAGGCTGATCTTTGCTGGAAAGCAACTCGAAGATGGTCGAACCCTTGCTGATTATAAC 67608 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 ||||| || || || || || || || || | ||||| || || |||| Sbjct 67609 ATACAGAAGGAGTCCACCCTCCACTTGGTTCTCCGTCTCCGTGGAGGCA 67657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422578478563000