Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq548 96.9 7e-15 seq8648 93.3 9e-14 seq8127 91.5 3e-13 seq1765 91.5 3e-13 seq1642 91.5 3e-13 seq1605 91.5 3e-13 seq165 91.5 3e-13 seq100 89.7 1e-12 seq5982 87.8 4e-12 seq5914 87.8 4e-12 seq5055 87.8 4e-12 seq2805 87.8 4e-12 seq1610 87.8 4e-12 seq823 87.8 4e-12 seq687 87.8 4e-12 seq649 87.8 4e-12 seq70293 86.0 1e-11 seq5789 86.0 1e-11 >seq548 Length=231306 Score = 96.9 bits (106), Expect = 7e-15 Identities = 193/286 (67%), Gaps = 0/286 (0%) Strand=Plus/Minus Query 218517 TGACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCC 218576 |||||| || ||||||| || || || || || |||| | || | || ||||| Sbjct 76174 TGACTTTGTCAACAAGGAACTTATACTATTTTCAATAGCTGATCTTCAGAGATCAATTCC 76115 Query 218577 CAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCG 218636 | |||| || || | || || || | ||||| ||||| || || ||| | Sbjct 76114 ATCCATGGTTGACGGATTGAAACCTGGTCAAAGAAAGATTCTCTTCTGTGCTTTTAAGAG 76055 Query 218637 GAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGG 218696 ||| | || || ||| || || | || ||| ||||||||||||| || |||| Sbjct 76054 AAACTTTGTCCATGAAGCAAAAGTTGGCCAATTTGCTGGTTATGTATCTGAGCACTCTGC 75995 Query 218697 CTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGT 218756 |||||||| || ||||||||||| || ||||| | |||||||| || | ||||| Sbjct 75994 TTACCATCATGGCGAGCAGAGTCTTGCCAGTACCATTATTGGCATGGCTCAAAAATATGT 75935 Query 218757 GGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGT 218802 |||||| |||||||| || | || || || ||||| || ||| Sbjct 75934 GGGCAGCAACAACATAAATATTCTAAAACCAAATGGTCAATTCGGT 75889 >seq8648 Length=39181 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 32527 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 32468 Query 142563 CCCCAC 142568 |||||| Sbjct 32467 CCCCAC 32462 >seq8127 Length=67524 Score = 91.5 bits (100), Expect = 3e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 142499 AGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTT 142558 || ||||||| ||||||||| |||||||||| || ||||||| || ||||||||||||| Sbjct 2514 AGTTAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTT 2573 Query 142559 CGAGCCCCAC 142568 |||||||||| Sbjct 2574 CGAGCCCCAC 2583 >seq1765 Length=195118 Score = 91.5 bits (100), Expect = 3e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 142499 AGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTT 142558 ||| |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||| Sbjct 50776 AGAAAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTT 50835 Query 142559 CGAGCCCCAC 142568 |||||||||| Sbjct 50836 CGAGCCCCAC 50845 >seq1642 Length=98845 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||| Sbjct 9280 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 9339 Query 142564 CCCAC 142568 ||||| Sbjct 9340 CCCAC 9344 >seq1605 Length=203932 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||| Sbjct 41966 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 42025 Query 142564 CCCAC 142568 ||||| Sbjct 42026 CCCAC 42030 >seq165 Length=271287 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||| Sbjct 78375 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 78316 Query 142564 CCCAC 142568 ||||| Sbjct 78315 CCCAC 78311 >seq100 Length=450663 Score = 89.7 bits (98), Expect = 1e-12 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 23777 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 23718 Query 142563 CCCCACATCGGGCAGAAGT 142581 |||||| |||| |||| Sbjct 23717 CCCCACGGTGGGCGTAAGT 23699 >seq5982 Length=115942 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 99867 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 99926 Query 142563 CCCCAC 142568 |||||| Sbjct 99927 CCCCAC 99932 >seq5914 Length=56761 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 50550 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 50609 Query 142563 CCCCAC 142568 |||||| Sbjct 50610 CCCCAC 50615 >seq5055 Length=105958 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 56008 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 56067 Query 142563 CCCCAC 142568 |||||| Sbjct 56068 CCCCAC 56073 >seq2805 Length=141015 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||| ||||||||||| || ||||||| || ||||||||||||||||| Sbjct 55103 AGCCCGTCTAGCTCAGCCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 55044 Query 142563 CCCCAC 142568 |||||| Sbjct 55043 CCCCAC 55038 >seq1610 Length=129570 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 18190 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 18131 Query 142563 CCCCAC 142568 |||||| Sbjct 18130 CCCCAC 18125 >seq823 Length=190768 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||| ||||||||||| || ||||||| || ||||||||||||||||| Sbjct 165604 AGCCCGTCTAGCTCAGCCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 165545 Query 142563 CCCCAC 142568 |||||| Sbjct 165544 CCCCAC 165539 >seq687 Length=271479 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 239017 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 238958 Query 142563 CCCCAC 142568 |||||| Sbjct 238957 CCCCAC 238952 >seq649 Length=148848 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 106484 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 106425 Query 142563 CCCCAC 142568 |||||| Sbjct 106424 CCCCAC 106419 >seq70293 Length=1295 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||| ||||||||||| || ||||||| || |||||||||||||||||| Sbjct 811 GCCCGTCTAGCTCAGCCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 752 Query 142564 CCCAC 142568 ||||| Sbjct 751 CCCAC 747 >seq5789 Length=156989 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 49486 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 49545 Query 142564 CCCAC 142568 ||||| Sbjct 49546 CCCAC 49550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1026657962732115