Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq170 89.7 5e-13 >seq170 Length=341306 Score = 89.7 bits (98), Expect = 5e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 20239 ACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAAC 20298 |||| ||||||||||| ||| | || || || | ||| || ||||||||||| || Sbjct 142875 ACCACAAACATGAGCAATCATGCATGTCAATAGAGCATATGATGCGATGTTAAAAGGCAC 142934 Query 20299 TCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTAC 20358 || | |||||| || |||| | |||||||| |||||| || ||||| || | ||||| Sbjct 142935 CCCAAGACCCATATCAGCCGAGCACTGATACATCTGACACGATAGCTCGCCATTGGCTAC 142994 Query 20359 ATAAAATTG 20367 |||||| || Sbjct 142995 ATAAAACTG 143003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440878931422600