Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_016765.1 Length=54024 Score E Sequences producing significant alignments: (Bits) Value seq79949 84.2 8e-12 >seq79949 Length=1573 Score = 84.2 bits (92), Expect = 8e-12 Identities = 112/154 (73%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 45488 TCGCGTCAGATGAAGCTGTTGGCAAGGGAGATTGGGTGTCCTGTGCTTCCCCTCTGCCAG 45547 ||||| | || ||||| | || | |||| | | ||| || || | | || ||||| Sbjct 286 TCGCGCAACATCAAGCTCCTCGCCAAGGAGCTCGAGTGCCCCGTCGTGGCGATCAGCCAG 345 Query 45548 CTCAACCGAGGTTGCGAGTCTCGCCCCGACAAGCGTCCG--GTCCTCAGCGACCTGCGCG 45605 || ||||| || | |||| ||| |||||||| ||| | ||||| ||||||||| Sbjct 346 CTGAACCGTGGATCCGAGCAGCGCACCGACAAGACGCCGCAGATCTCAG--ACCTGCGCG 403 Query 45606 AGTCCGGCGCCATTGAGCAAGACGCCGACATCGT 45639 |||||||| | || ||||| |||||||||||||| Sbjct 404 AGTCCGGCTCGATCGAGCAGGACGCCGACATCGT 437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 172571562841980