Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_018848.1 Length=37612 Score E Sequences producing significant alignments: (Bits) Value seq59516 105 2e-18 >seq59516 Length=1985 Score = 105 bits (116), Expect = 2e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 30163 CGCCTGATGGCCGGAGACACCCCGATCACCGTTGTGGGCAACGTCGTTGCCGACCCCGAA 30222 |||| ||||| || || || |||||||| | |||||| | | |||||| || Sbjct 1302 CGCCACATGGCAGGCGAAACGATCATCACCGTCATCGGCAACCTGACCGACGACCCGGAG 1243 Query 30223 CTCAGGTTCACCCCCGCCGGCGCCGCCGTCGCGAACTTCCGGCTCGCCTCGACCCCCCGC 30282 |||| |||||| || | |||||||| || || |||||| |||| ||||| || || Sbjct 1242 CTCAAGTTCACTCCTTCGGGCGCCGCAGTTGCCAACTTCACCGTCGCGTCGACGCCTCGA 1183 Query 30283 ACGTTCGACCGCACCGCCAACGAATGGCGAGACGGCGAGACCCTGTTCCTGTCCGTCTCC 30342 || |||| || ||||||| ||| ||||||||| | |||||| | | | || Sbjct 1182 ACCCTCGATCGTCAGACCAACGAGTGGAAGGACGGCGAGGCTCTGTTCATTCGCTGCGCC 1123 Query 30343 GTATGGCGCCAGCAGGCCGAGAACGTCGCCG 30373 | |||||||||| |||||||||||||||| Sbjct 1122 GCCTGGCGCCAGCTCGCCGAGAACGTCGCCG 1092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120108989408820