Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq67899 98.7 1e-15 >seq67899 Length=1076 Score = 98.7 bits (108), Expect = 1e-15 Identities = 166/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 84449 TGCTGGATCGAACCCTCGGCCGCGACGATTGACTTCCAGACCGCCTCGGTGTTCAGGCCC 84508 ||||||| ||| || | | ||| ||| || ||||| ||||||||| ||||| | Sbjct 841 TGCTGGACCGAGCCGCCATTCTCGAGGATCGAGTTCCACACCGCCTCGCTGTTCTT--CG 898 Query 84509 AGTTCACCCAG-GC-GCTTCTTCAGCCAGCGGTTCTTGACGGCGAACGAGCCCGACAGGG 84566 | ||| | | || |||||| ||| | |||||||||| | ||| ||||||||| | Sbjct 899 ACTTCTCGTTGAGCAGCTTCTCCAGATACGGGTTCTTGACCGAGAAGCTGCCCGACAGCG 958 Query 84567 TCTTGTGCAGGAAGGTGTTGGCCGGGATCGGCTCGATCGACGGCGAGGTGCC-TCCGCAG 84625 |||||||| | || |||| || |||||||||||||| | | ||| ||||| || ||| Sbjct 959 TCTTGTGCGTGTAGATGTTTGCGGGGATCGGCTCGATACAGGCCGACGTGCCGGCCACAG 1018 Query 84626 AGGATCGAGGACGAGGC-GTTGGGCGCCACGGCCAGCTTGTGGGCGAACCGCTC 84678 | ||| | ||| || || || ||| | |||| |||| | ||||||||| Sbjct 1019 ATGATGCTGATCGACGCGGTCGGCCGCGATCGCCATCTTGCAGCTGAACCGCTC 1072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 689371771998000