Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_019410.1 Length=221828 Score E Sequences producing significant alignments: (Bits) Value seq67899 105 9e-18 >seq67899 Length=1076 Score = 105 bits (116), Expect = 9e-18 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 84575 TGCTGGATCGAGCCCTCGGCCGCGACGATCGACTTCCAGACCGCCTCGGTGTCCAGGCCC 84634 ||||||| |||||| | | ||| |||||| ||||| ||||||||| ||| | | Sbjct 841 TGCTGGACCGAGCCGCCATTCTCGAGGATCGAGTTCCACACCGCCTCGCTGTTCTTCGAC 900 Query 84635 AGTTCGCCCAGGCGCTTCTTCAGCCAGCGGTTCTTGACGGCGAACGAGCCCGACAGGGTC 84694 ||| || |||||| ||| | |||||||||| | ||| ||||||||| ||| Sbjct 901 TTCTCGTTGAGCAGCTTCTCCAGATACGGGTTCTTGACCGAGAAGCTGCCCGACAGCGTC 960 Query 84695 TTGTGCAGGAAGGTGTTGGCCGGGATCGGCTCGATCGACGGCGAGGTGCC-CCCGCAGAG 84753 |||||| | || |||| || |||||||||||||| | | ||| ||||| || |||| Sbjct 961 TTGTGCGTGTAGATGTTTGCGGGGATCGGCTCGATACAGGCCGACGTGCCGGCCACAGAT 1020 Query 84754 GATCGAGGACGAGGC-GTTGGGCGCCACGGCCAGCTTGTGGGCGAACCGCTC 84804 ||| | ||| || || || ||| | |||| |||| | ||||||||| Sbjct 1021 GATGCTGATCGACGCGGTCGGCCGCGATCGCCATCTTGCAGCTGAACCGCTC 1072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708927465887200