Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_019411.1 Length=219216 Score E Sequences producing significant alignments: (Bits) Value seq67899 96.9 5e-15 >seq67899 Length=1076 Score = 96.9 bits (106), Expect = 5e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 83732 TGCTGGATCGACCCCTCGGCCGCGACGATCGACTTCCAGACCGCCTCGGTGTCCAGGCCC 83791 ||||||| ||| || | | ||| |||||| ||||| ||||||||| ||| | | Sbjct 841 TGCTGGACCGAGCCGCCATTCTCGAGGATCGAGTTCCACACCGCCTCGCTGTTCTTCGAC 900 Query 83792 AGTTCGCCCAGGCGCTTCTTCAGCCAGCGGTTCTTGACGGCGAACGAGCCCGACAGGGTC 83851 ||| || |||||| ||| | |||||||||| | ||| ||||||||| ||| Sbjct 901 TTCTCGTTGAGCAGCTTCTCCAGATACGGGTTCTTGACCGAGAAGCTGCCCGACAGCGTC 960 Query 83852 TTGTGCAGGAAGGTGTTGGCCGGGATCGGCTCGATCGACGGCGAGGTGCC-CCCGCAAAG 83910 |||||| | || |||| || |||||||||||||| | | ||| ||||| || || | Sbjct 961 TTGTGCGTGTAGATGTTTGCGGGGATCGGCTCGATACAGGCCGACGTGCCGGCCACAGAT 1020 Query 83911 GATCGAGGACGAGGC-GTTGGGCGCCACGGCCAGCTTGTGGGCGAACCGCTC 83961 ||| | ||| || || || ||| | |||| |||| | ||||||||| Sbjct 1021 GATGCTGATCGACGCGGTCGGCCGCGATCGCCATCTTGCAGCTGAACCGCTC 1072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700578418414400