Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20]
89,515 sequences; 867,455,155 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq3095 123 5e-23
seq341 118 2e-21
>seq3095
Length=123113
Score = 123 bits (136), Expect = 5e-23
Identities = 377/577 (65%), Gaps = 13/577 (2%)
Strand=Plus/Minus
Query 48122 TAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAG 48181
||||||| ||| ||||| || | ||| || || || || || ||| | | |||| ||
Sbjct 111594 TAGAGCAGGCAAGCAAAATCACAGTGTAAACCCTCATCTCGCGAGATTAACTCGTTTGAA 111535
Query 48182 AAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCA 48241
|| | |||||||| | || | || ||| ||||| || || || ||| ||
Sbjct 111534 AAAGTTAATCCAGGCATTAATCCACGCTTTTTTAGCCAAAATATCGCGCAGAAGCTTCCC 111475
Query 48242 GAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTC 48301
|||||||| || || || || || || ||| | | ||| |||| || |||
Sbjct 111474 GAGAAGAAAATCCCTTCGACGCAAGCAAAGGCGAGTATGCGCTCAGCGAAGGA----TTC 111419
Query 48302 TTGTCTGAGA-TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTC 48360
| | | | ||||| || ||||| | ||||||||| | || || | |||||
Sbjct 111418 TGAGCCGTCAATCCAGCGGAGGGCCCACTTGGCCTTCTTCCCAACACAAGGAACGGTCTC 111359
Query 48361 TATGGCCCGGAAGAGC---TTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAG 48417
|| || |||| ||| ||||| ||| | | ||| | ||||| || ||
Sbjct 111358 GATTGCGTGGAAAAGCCGATTCTT---CTCCTCCGAATCCTTTATATAGGACTCAAGAAG 111302
Query 48418 CTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCT 48477
||||||||| || || | |||||| || |||||||||||||| || || || |
Sbjct 111301 AAGACTGTACATCTCGGAATGGATATTCTCAATCGCGATCTGGAACCCATAAAAAGCACG 111242
Query 48478 GGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCC 48536
||||| | | || || ||| | ||| ||| ||||| |||||||| || || |
Sbjct 111241 CGCCTCCGAGATTTGAACCTCTTTCATGAACCTC-CCAGCTAGATTCTCCAAAACAATGC 111183
Query 48537 CATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA 48596
| || || || ||||| |||||||| ||||| |||| |||||| ||| | | ||| |
Sbjct 111182 CGTCGGAGGCGGCAAAAAAGGCAAGAACATGCTTAATGAAATGCTTCTCATCCTCGGTCA 111123
Query 48597 GAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACG 48656
|| |||| |||||| || | | || || || |||||| | ||||| || || |
Sbjct 111122 ATTTATCCCAGTGCTGTACATCCTGGGACAAATCAACCTCTTCCGCCGTCCAAAACGAGG 111063
Query 48657 CGAGTGCTTTTTTGTACATGCCCCATATGTCCGGATA 48693
| ||| || |||||||| |||| || | |||||
Sbjct 111062 CCTCTGCCTTCTTGTACATTTCCCAAATTTGGGGATA 111026
>seq341
Length=228855
Score = 118 bits (130), Expect = 2e-21
Identities = 373/574 (65%), Gaps = 7/574 (1%)
Strand=Plus/Plus
Query 48122 TAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAG 48181
||||||| ||| ||||| || | ||| ||||| || || || ||| | | |||| |||
Sbjct 2763 TAGAGCAAGCACGCAAAATCACAGTGTAAGCCCTCATCTCGAGAGATCAACTCGTTCGAG 2822
Query 48182 AAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCA 48241
|| | |||||||| | || | || || ||||| || ||||| ||| ||
Sbjct 2823 AAAGTTAATCCAGGCATTAATCCTCGCTTCTTTAGCCAAAATATTGCGCAGAAGCTTCCC 2882
Query 48242 GAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTC 48301
|||||||| || || || || ||||| ||| | | ||| | || || ||
Sbjct 2883 GAGAAGAAAATCCCTTCAACGCAAGCGAAGGCGAGTATACGCTCAGCAAAGGAC----TC 2938
Query 48302 TT-GTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTC 48360
| | | ||||||| || ||||| | |||||||||| | || || | |||||
Sbjct 2939 TGAGCCATCGATCCAGCGGAGGGCCCACTTGGCCTTCTTCTCCACACAAGGAACGGTCTC 2998
Query 48361 TATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTT 48420
|| || |||| ||| | || ||| | | ||| | ||| | || ||
Sbjct 2999 GATTGCGTGGAAAAGCCTATTCTTCTCCTCCGAATCCTTGATATAAGATTCAAGAAGAAG 3058
Query 48421 TGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGC 48480
|||||||||||| || | |||||| || ||||| |||||||| || || || | ||
Sbjct 3059 ACTGTACATCTCAGAATGGATATTCTCAATCGCGATTTGGAACCCATAAAACGCACGAGC 3118
Query 48481 CTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCAT 48539
||| | | || || || | ||| || |||||| || ||||| || || || |
Sbjct 3119 CTCCGAGATTTGAACCTCCTTCATGAACCT-TCCAGCGAGGTTCTCCAAAACGATGCCGT 3177
Query 48540 CTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAG 48599
|||| || || || |||||||| | || |||| |||||| ||||| | || ||
Sbjct 3178 CTGAGGCGGCGAAAAAGGCAAGAATGTGCTTAATGAAATGCTTCTCGTCCTCAGTCAGTT 3237
Query 48600 CATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGA 48659
| |||| ||||| || | | || || || |||||| | ||||| || || ||
Sbjct 3238 TTTCCCAGTGCTGTATATCCTGGGACAAATCGACCTCTTCCGCCGTCCAAAACGAGGCCT 3297
Query 48660 GTGCTTTTTTGTACATGCCCCATATGTCCGGATA 48693
|||||| |||||||| |||| || | |||||
Sbjct 3298 CTGCTTTCTTGTACATTTCCCAAATTTTGGGATA 3331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 930490473017600
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