Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_021061.1 Length=41491 Score E Sequences producing significant alignments: (Bits) Value seq29129 80.6 7e-11 >seq29129 Length=645 Score = 80.6 bits (88), Expect = 7e-11 Identities = 112/153 (73%), Gaps = 12/153 (8%) Strand=Plus/Plus Query 32497 CTGCACGCAGACCGACCCCGAGGTGTTCTTTCCCGAGAAAGGCGA----ACCCGTT-GGC 32551 |||| | |||||||||||||| | ||||| |||||||| |||| ||||| ||| Sbjct 447 CTGCGCCCAGACCGACCCCGAAGCATTCTTCCCCGAGAAGGGCGGCTCGACCCGCGAGGC 506 Query 32552 CCCGCGCGCAATATCTGCAGGCGGTGCGAAGTGCA-GGCGAAGTGCCTCGAGGTTGCACT 32610 | ||||| ||||| | |||||| || | ||||| ||||||||| || || Sbjct 507 CAAGCGCG-----TCTGCCTGACGTGCGACGTCCGCGGCGA-GTGCCTCGACTACGCCCT 560 Query 32611 CGCCCGCGAAGAAGAGTTCGGCATCTGGGGCGG 32643 ||||| ||| ||| ||||||||||||||||| Sbjct 561 CGCCCACGACGAACGCTTCGGCATCTGGGGCGG 593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132508594718790