Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_021302.1 Length=47109 Score E Sequences producing significant alignments: (Bits) Value seq15399 80.6 8e-11 >seq15399 Length=996 Score = 80.6 bits (88), Expect = 8e-11 Identities = 124/177 (70%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 34660 AGGCGATCGAGCTCGTCGTCGAGTCTCAGATGGGCTCGGCGTCGATGCTGCAATACAAGC 34719 |||| |||||||| |||| | | ||| | |||||| ||||||||||||| ||||| Sbjct 307 AGGCCATCGAGCTGTGCGTCACGACGCAGTTCGGCTCGACGTCGATGCTGCAGCGCAAGC 248 Query 34720 TCGACGTCGGGTTCGCCCGGGCGCAACGCCTGCTCGACGAGATGGAGGCACTCGGCATCG 34779 | |||||| ||||| ||| ||||||| | ||| ||||| | |||||||| Sbjct 247 TGCGCGTCGGCTTCGCGAAGGCCGGACGCCTGATGGACATCCTGGAGAGCCGCGGCATCG 188 Query 34780 TCGGCGAGGCGCAGGGCAGCATGGCGCGTCCGGTGTTCTTCAAGGCCGACGACCTCG 34836 ||||| | ||||| | ||| ||| ||| | ||||| ||||||| |||| Sbjct 187 TCGGCCCGAGTGAGGGCTCGAAGGCACGTGACGTGCTGATCAAGCCCGACGAGCTCG 131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150467084698530