Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_021306.1 Length=75736 Score E Sequences producing significant alignments: (Bits) Value seq62369 165 4e-36 seq86170 118 5e-22 >seq62369 Length=566 Score = 165 bits (182), Expect = 4e-36 Identities = 249/354 (70%), Gaps = 0/354 (0%) Strand=Plus/Minus Query 65063 GACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCG 65122 || ||||| || || ||| | | | || ||| ||| || |||||||| || ||| Sbjct 354 GAGGTCATCCCGACGGGCGCCACGACGCTCGACATCGCGCTCGGCATCGGCGGACTGCCG 295 Query 65123 AGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTC 65182 | ||||| || || || |||||||| || || || || || ||| | || | || Sbjct 294 CGCGGCCGTGTCGTCGAGATCTACGGTCCGGAGTCGTCGGGTAAGACGACCGTCGCCCTG 235 Query 65183 CACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCAC 65242 |||||||||||||| || ||| |||||||| ||| |||| ||||||||| |||||| Sbjct 234 CACGCGGTGGCCAACGCCCAGCGCGCCGGTGGTGTCGCGGCCTTCATCGACGCCGAGCAC 175 Query 65243 TCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTT 65302 | || ||||| || |||||| |||||| || ||| |||| ||| || | Sbjct 174 GCGCTCGACCCCGACTACGCCCGCAAGCTCGGCGTCGACACCGACGCCCTGCTGATCTCG 115 Query 65303 CAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAG 65362 ||||| |||| || |||||||| || ||||||| ||| | || || || |||| Sbjct 114 CAGCCCGACAGCGGTGAGCAGGCTCTCGAGATCGCCGACATGCTGATCCGCTCCGGCGCC 55 Query 65363 CTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTC 65416 || |||| ||||| | ||||| || ||||| || ||||| ||||||||| || Sbjct 54 CTCGACATCATCGTCATCGACTCCGTCGCGGCGCTCGTGCCCCGCGCCGAGATC 1 >seq86170 Length=626 Score = 118 bits (130), Expect = 5e-22 Identities = 173/241 (72%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 65666 GTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAAC 65725 ||||||||||||||||| || |||||||||||||||||||| ||||||||| | | Sbjct 601 GTCGGCAACCGCACCCGCGTCAAGGTCGTCAAGAACAAGCTCGCCCCGCCGTTCAAGCAG 542 Query 65726 GCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTG 65785 ||||||||| | || ||||||| |||||||| || |||| | || ||||| | Sbjct 541 GCCGAGTTCGACATCATGTACGGCCAGGGCATCAGCCGCGAGGGCAGCCTGATCGAC--G 484 Query 65786 GCCGTGTCG-CA-GGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGA 65843 | | |||| || || ||||| ||| | |||||||||| || ||||| | | | Sbjct 483 TCGGCGTCGACATCGGTCTGGTCCGCAAGGCCGGCGCCTGGTACACGTACGACGGCGACC 424 Query 65844 ACGTCGCTCAGGGCAAGCCCAAGGCCGTCCAGTGGCTCAAGGCCAACCCGGACATCACCG 65903 | | | |||||||||| ||| | |||| ||||||| |||||| ||| | ||| Sbjct 423 AGCTGGGTCAGGGCAAGGAGAAGTCGCGGCAGTTCCTCAAGGACAACCCCGACCTGGCCG 364 Query 65904 A 65904 | Sbjct 363 A 363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 241966135338755