Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_022059.1 Length=77367 Score E Sequences producing significant alignments: (Bits) Value seq62369 170 9e-38 seq86170 114 6e-21 seq59516 95.1 6e-15 >seq62369 Length=566 Score = 170 bits (188), Expect = 9e-38 Identities = 234/327 (72%), Gaps = 0/327 (0%) Strand=Plus/Minus Query 67589 CTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGGTAGTGGAGATCTACGGT 67648 || ||| ||| ||||||||||| || ||| | ||||| || || |||||||||||| Sbjct 327 CTCGACATCGCGCTCGGCATCGGCGGACTGCCGCGCGGCCGTGTCGTCGAGATCTACGGT 268 Query 67649 CCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGGCCAATGCCCAGAAGGCC 67708 || ||||| || || ||| | || | ||| |||||||||||||| |||||| ||| Sbjct 267 CCGGAGTCGTCGGGTAAGACGACCGTCGCCCTGCACGCGGTGGCCAACGCCCAGCGCGCC 208 Query 67709 GGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGACCCTGAGTACGCCGCGGCG 67768 ||||| ||| |||| |||||||||||| || | |||||||| || |||||| | Sbjct 207 GGTGGTGTCGCGGCCTTCATCGACGCCGAGCACGCGCTCGACCCCGACTACGCCCGCAAG 148 Query 67769 CTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAGACACTGGCGAGCAGGCCCTG 67828 ||||| || || |||| || || | |||||| |||| || |||||||| || Sbjct 147 CTCGGCGTCGACACCGACGCCCTGCTGATCTCGCAGCCCGACAGCGGTGAGCAGGCTCTC 88 Query 67829 GAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTGTG 67888 ||||||| ||| | || || || |||| | ||||||||| | ||||| || Sbjct 87 GAGATCGCCGACATGCTGATCCGCTCCGGCGCCCTCGACATCATCGTCATCGACTCCGTC 28 Query 67889 GCGGCCCTGGTGCCGCGGGCGGAGCTC 67915 ||||| || ||||| || || ||| || Sbjct 27 GCGGCGCTCGTGCCCCGCGCCGAGATC 1 >seq86170 Length=626 Score = 114 bits (126), Expect = 6e-21 Identities = 168/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 68165 GTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAG 68224 |||||||||||||| ||||| ||||| |||||||||||||| || || ||| | ||| Sbjct 601 GTCGGCAACCGCACCCGCGTCAAGGTCGTCAAGAACAAGCTCGCCCCGCCGTTCAAGCAG 542 Query 68225 GCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTCCCGCGAGGCCGAACTCCTCGACATG 68284 || ||||| |||| | |||||| ||||||| |||||||| | || ||||| | Sbjct 541 GCCGAGTTCGACATCATGTACGGCCAGGGCATCAGCCGCGAGGGCAGCCTGATCGACGTC 482 Query 68285 GCCGTTTCCCGAGGGCTCATCAAGAAGTCTGGGGCCTGGTTCAAGTACGGGGACAAGAAC 68344 | ||| | || || || ||| | || ||||||| || ||||| | | | | Sbjct 481 GGCGTCGACATCGGTCTGGTCCGCAAGGCCGGCGCCTGGTACACGTACGACGGCGACCAG 422 Query 68345 ATCGGCCAGGGCAAGCCCAAGACCGTGCAGTGGCTGAAGGACAACCCGGACGTCGCCG 68402 | || ||||||||| ||| | ||||| || ||||||||||| ||| | |||| Sbjct 421 CTGGGTCAGGGCAAGGAGAAGTCGCGGCAGTTCCTCAAGGACAACCCCGACCTGGCCG 364 >seq59516 Length=1985 Score = 95.1 bits (104), Expect = 6e-15 Identities = 215/314 (68%), Gaps = 17/314 (5%) Strand=Plus/Minus Query 60956 TCGTCGGCACCCTGACCGCCGACCCCGAGCTGCGGTTCAC-CCAAGGTGGGCAGGCCGTC 61014 || |||||| |||||||| |||||| ||||| |||||| || | | || | | || Sbjct 1271 TCATCGGCAACCTGACCGACGACCCGGAGCTCAAGTTCACTCCTTCGGGCGCCG-CAGTT 1213 Query 61015 GCCAACTTCACCGTCGTGTCCAA----CGAACGCCGCCGCGACGCCCAGGGCAAC---TG 61067 |||||||||||||||| ||| | ||||| || ||| ||| |||| || Sbjct 1212 GCCAACTTCACCGTCGCGTCGACGCCTCGAAC----CCTCGATCGTCAGACCAACGAGTG 1157 Query 61068 GGTCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGT 61127 | |||||||| || ||| | |||||| || ||||||| | |||||||||||| Sbjct 1156 GAAGGACGGCGAGGCTCTGTTCATTCGCTGCGCCGCCTGGCGCCAGCTCGCCGAGAACGT 1097 Query 61128 AGCGGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCA-GCGCT 61186 || || || ||||| || |||| |||||||| || ||| || |||| ||| Sbjct 1096 CGCCGAGTCGCTGCAGAAGGGTCAGCAGGTCATCGTCCAGGGCCCGCT-GAGCATCCGCA 1038 Query 61187 CCTTCGAGACCAAGGAAGGCGACAAGC-GCACCGTCATCGAGGTGGAGGTAGACGAGATC 61245 || |||| |||| || | || |||| | ||||| || ||| |||||||| Sbjct 1037 ACTACGAGCGTCAGGACGG-ATCGCGCGGCACGAGCGTCGAGATGACGGTCAACGAGATC 979 Query 61246 GGCCCGTCGCTGCG 61259 || ||||||||||| Sbjct 978 GGTCCGTCGCTGCG 965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247179641379120