Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq2899 82.4 1e-10 >seq2899 Length=99563 Score = 82.4 bits (90), Expect = 1e-10 Identities = 137/194 (71%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 193433 TCAGTTACGTATACCTGAAATAGGGGATAAATTTTGTT-CAGGAATGGCCCAAAAAGGAA 193491 |||||| || || ||| |||| || || |||||| | |||| |||| | | || |||| Sbjct 89983 TCAGTT-CGAATTCCTCAAATTGGAGACAAATTTAGCAGCAGGCATGGTC-AGAAGGGAA 90040 Query 193492 CTTGTGGTATGATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAG 193551 | |||||||| ||| |||||||||||||||||| || | ||| || || | Sbjct 90041 CAGTTGGTATGACTTACACACAAGAAGATATGCCATGGACTGTGGAAGGCATCACTCCTG 90100 Query 193552 ATATTATTATTAATCCAAATTGTATTCCATCCAGAATGACCATTAATCAAATTATTGCCA 193611 | || || | ||||| || |||||| || | ||||||||| ||| |||||| Sbjct 90101 ACATCATCGTGAATCCCCATGCTATTCCTTCTCGCATGACCATTGGTCAGCTTATTGAGT 90160 Query 193612 CTGTTATGGGCAAA 193625 ||| ||||||||| Sbjct 90161 GTGTCATGGGCAAA 90174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634466875964200