Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_023689.1 Length=76260 Score E Sequences producing significant alignments: (Bits) Value seq62369 165 4e-36 seq86170 118 5e-22 seq59516 91.5 7e-14 >seq62369 Length=566 Score = 165 bits (182), Expect = 4e-36 Identities = 249/354 (70%), Gaps = 0/354 (0%) Strand=Plus/Minus Query 66172 GACGTCATTCCCACCGGCTCTATCGCCCTGGACGGCGCTCTGGGCATCGGGGGGTACCCG 66231 || ||||| || || ||| | | | || ||| ||| || |||||||| || ||| Sbjct 354 GAGGTCATCCCGACGGGCGCCACGACGCTCGACATCGCGCTCGGCATCGGCGGACTGCCG 295 Query 66232 AGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTC 66291 | ||||| || || || |||||||| || || || || || ||| | || | || Sbjct 294 CGCGGCCGTGTCGTCGAGATCTACGGTCCGGAGTCGTCGGGTAAGACGACCGTCGCCCTG 235 Query 66292 CACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCAC 66351 |||||||||||||| || ||| |||||||| ||| |||| ||||||||| |||||| Sbjct 234 CACGCGGTGGCCAACGCCCAGCGCGCCGGTGGTGTCGCGGCCTTCATCGACGCCGAGCAC 175 Query 66352 TCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTT 66411 | || ||||| || |||||| |||||| || ||| |||| ||| || | Sbjct 174 GCGCTCGACCCCGACTACGCCCGCAAGCTCGGCGTCGACACCGACGCCCTGCTGATCTCG 115 Query 66412 CAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAG 66471 ||||| |||| || |||||||| || ||||||| ||| | || || || |||| Sbjct 114 CAGCCCGACAGCGGTGAGCAGGCTCTCGAGATCGCCGACATGCTGATCCGCTCCGGCGCC 55 Query 66472 CTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTC 66525 || |||| ||||| | ||||| || ||||| || ||||| ||||||||| || Sbjct 54 CTCGACATCATCGTCATCGACTCCGTCGCGGCGCTCGTGCCCCGCGCCGAGATC 1 >seq86170 Length=626 Score = 118 bits (130), Expect = 5e-22 Identities = 173/241 (72%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 66775 GTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAAC 66834 ||||||||||||||||| || |||||||||||||||||||| ||||||||| | | Sbjct 601 GTCGGCAACCGCACCCGCGTCAAGGTCGTCAAGAACAAGCTCGCCCCGCCGTTCAAGCAG 542 Query 66835 GCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTG 66894 ||||||||| | || ||||||| |||||||| || |||| | || ||||| | Sbjct 541 GCCGAGTTCGACATCATGTACGGCCAGGGCATCAGCCGCGAGGGCAGCCTGATCGAC--G 484 Query 66895 GCCGTGTCG-CA-GGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGA 66952 | | |||| || || ||||| ||| | |||||||||| || ||||| | | | Sbjct 483 TCGGCGTCGACATCGGTCTGGTCCGCAAGGCCGGCGCCTGGTACACGTACGACGGCGACC 424 Query 66953 ACGTCGCTCAGGGCAAGCCCAAGGCCGTCCAGTGGCTCAAGGCCAACCCGGACATCACCG 67012 | | | |||||||||| ||| | |||| ||||||| |||||| ||| | ||| Sbjct 423 AGCTGGGTCAGGGCAAGGAGAAGTCGCGGCAGTTCCTCAAGGACAACCCCGACCTGGCCG 364 Query 67013 A 67013 | Sbjct 363 A 363 >seq59516 Length=1985 Score = 91.5 bits (100), Expect = 7e-14 Identities = 214/314 (68%), Gaps = 17/314 (5%) Strand=Plus/Minus Query 60623 TCGTCGGCACGCTGACCGCCGACCCCGAGCTGCGGTTCAC-CCAAGGTGGGCAGGCCGTC 60681 || |||||| ||||||| |||||| ||||| |||||| || | | || | | || Sbjct 1271 TCATCGGCAACCTGACCGACGACCCGGAGCTCAAGTTCACTCCTTCGGGCGCCG-CAGTT 1213 Query 60682 GCCAACTTCACCGTCGTGTCCAA----CGAACGCCGCCGCGACGCCCAGGGCAAC---TG 60734 |||||||||||||||| ||| | ||||| || ||| ||| |||| || Sbjct 1212 GCCAACTTCACCGTCGCGTCGACGCCTCGAAC----CCTCGATCGTCAGACCAACGAGTG 1157 Query 60735 GGTCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGT 60794 | |||||||| || ||| | |||||| || ||||||| | |||||||||||| Sbjct 1156 GAAGGACGGCGAGGCTCTGTTCATTCGCTGCGCCGCCTGGCGCCAGCTCGCCGAGAACGT 1097 Query 60795 GGCGGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCA-GCGCT 60853 || || || ||||| || |||| |||||||| || ||| || |||| ||| Sbjct 1096 CGCCGAGTCGCTGCAGAAGGGTCAGCAGGTCATCGTCCAGGGCCCGCT-GAGCATCCGCA 1038 Query 60854 CCTTCGAGACCAAGGAGGGCGACAAGC-GCACCGTCATCGAGGTGGAGGTAGACGAGATC 60912 || |||| |||| || | || |||| | ||||| || ||| |||||||| Sbjct 1037 ACTACGAGCGTCAGGACGG-ATCGCGCGGCACGAGCGTCGAGATGACGGTCAACGAGATC 979 Query 60913 GGCCCGTCGCTGCG 60926 || ||||||||||| Sbjct 978 GGTCCGTCGCTGCG 965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243641106010215