Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_023690.1 Length=110569 Score E Sequences producing significant alignments: (Bits) Value seq15399 156 3e-33 >seq15399 Length=996 Score = 156 bits (172), Expect = 3e-33 Identities = 243/345 (70%), Gaps = 3/345 (1%) Strand=Plus/Plus Query 96964 ATCTCTCCGTCGGATACGAAAGCGCCCTGTATCCGGATGGCACCCCGCGCCCCCACGGGC 97023 ||||| | |||| || | |||||||| || || ||||| | |||| ||| Sbjct 433 ATCTCGGCCTCGGTGACCCATGCGCCCTGCATGCGCATGGCCTTGTTCTGGCCCATCGGC 492 Query 97024 AGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCGTCCAGGATCACC 97083 ||||| | ||||||||| || | ||||| |||||| ||| || ||| ||||| || Sbjct 493 AGGAACAGTCCGTCACCCTGGCCGACGAGCTTCTCGGCGCCGGGCTGGTCGAGGATGACG 552 Query 97084 CGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCACGTTGGATTTGATA 97143 ||||| |||| || || | || | ||||| || | ||||||||||| ||||| Sbjct 553 CGGCTGTCGGCCAGCGACGACGTCGGGAACGCCAGGCGGCTCGGCACGTTGGCCTTGATC 612 Query 97144 AGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATACCGGCT 97203 || || || || || || ||||| || ||||||||||| |||| || || || ||||| Sbjct 613 AGACCCGTCACGACGTCGACGGACGGTCGCTGCGTCGCGAGGATCAGGTGGATGCCGGCG 672 Query 97204 GCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTAGCCGCCC 97263 || || || ||| | ||| ||||| ||| ||||||| || || || || | || Sbjct 673 GCTCGGGCGAGCTGAGTGATACGGACGATGGAATCCTCGACATC--TCGTGGAG-CAACC 729 Query 97264 ATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGG 97308 ||||| ||||| ||||| |||||||| || |||| | ||| ||| Sbjct 730 ATCATCAGGTCGGCGAGCTCGTCGACGACCACCAGCAGGTACGGG 774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353310130374950