Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_024135.1 Length=42392 Score E Sequences producing significant alignments: (Bits) Value seq29129 113 1e-20 >seq29129 Length=645 Score = 113 bits (124), Expect = 1e-20 Identities = 135/181 (75%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 31497 GATCGTGCGCTGTGCCCGCAAACGGATCCCGACGTGTTCTTCCCCGAAAAGGGCGGCAGC 31556 || ||||| || ||| | || || || ||||| | ||||||||||| ||||||||| Sbjct 436 GAGCGTGCCCTCTGCGCCCAGACCGACCCCGAAGCATTCTTCCCCGAGAAGGGCGGCTCG 495 Query 31557 ACCAAAGAAGCGAAA-GCGATCTGTGGGCTGTGCGATGTCCGCAACGAATGCCTGGAGTA 31615 ||| || || || ||| |||| | |||||| |||||| ||| ||||| || || Sbjct 496 ACCCGCGAGGCCAAGCGCG-TCTGCCTGACGTGCGACGTCCGCGGCGAGTGCCTCGACTA 554 Query 31616 CGCGTTGGCGCACGACGAACGATTCGGCATCTGGGGCGGCTTATCCGAGCGTGACCGGCG 31675 ||| | || ||||||||||| ||||||||||||||||| | || ||||| || || || Sbjct 555 CGCCCTCGCCCACGACGAACGCTTCGGCATCTGGGGCGGGCTTTCGGAGCGAGAGCGCCG 614 Query 31676 C 31676 | Sbjct 615 C 615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135388729904220