Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_026606.1 Length=71200 Score E Sequences producing significant alignments: (Bits) Value seq59516 120 1e-22 >seq59516 Length=1985 Score = 120 bits (132), Expect = 1e-22 Identities = 246/362 (68%), Gaps = 8/362 (2%) Strand=Plus/Minus Query 62724 ACATGGCCGGTGAAACCACCATAACGGTGATAGGCAATCTGACGAACGATCCCGAATTAC 62783 ||||||| || ||||| | ||| || || || ||||| ||||| |||| || || | Sbjct 1298 ACATGGCAGGCGAAACGATCATCACCGTCATCGGCAACCTGACCGACGACCCGGAGCTCA 1239 Query 62784 GGTTCACGCCGTCCGGCAGCCCGGTGGCCAACTTCACCATTGCCAGCACCCCGCGCACGT 62843 |||||| || || ||| | | || |||||||||||| | || || || || || Sbjct 1238 AGTTCACTCCTTCGGGCGCCGCAGTTGCCAACTTCACCGTCGCGTCGACGCCTCGAACCC 1179 Query 62844 TCGACCGGCAGAGCAACGAGTGGAAGGACGGGGAAACCCTGTTTTTGCGC-GCGAGTATC 62902 |||| || |||| |||||||||||||||||| || | ||||| | ||| ||| | Sbjct 1178 TCGATCGTCAGACCAACGAGTGGAAGGACGGCGAGGCTCTGTTCATTCGCTGCG-CCGCC 1120 Query 62903 TGGCGCGACCCCGCGGAGAACGTGGCAGAGTCCCTGACCAAGGGCATGCGCGTGATTGTG 62962 |||||| | | ||| |||||||| || ||||| ||| ||||| || || || || Sbjct 1119 TGGCGCCAGCTCGCCGAGAACGTCGCCGAGTCGCTGCAGAAGGGTCAGCAGGTCATCGTC 1060 Query 62963 TCCGGGCGGCTCAAGTCCCGCAGCTACGAGACCAAGGAAGGCGAAAAGC---GCACGGTC 63019 || | ||| | ||||| ||||||| |||| || | || ||||| | Sbjct 1059 CAGGGCCCGCTGAGCATCCGCAACTACGAGCGTCAGGA---CGGATCGCGCGGCACGAGC 1003 Query 63020 ATTGAGCTTGAGGTGGACGAAATTGGCCCGTCTTTGCGCTATGCCAACGCCAAGGTGAAC 63079 | ||| | ||| |||| || || ||||| |||||| || | ||||||||| | | Sbjct 1002 GTCGAGATGACGGTCAACGAGATCGGTCCGTCGCTGCGCTTCGCGACCGCCAAGGTCACC 943 Query 63080 CG 63081 || Sbjct 942 CG 941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 227466770900315