Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq79949 84.2 9e-12 >seq79949 Length=1573 Score = 84.2 bits (92), Expect = 9e-12 Identities = 112/154 (73%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 53699 ACGATGTCGGCGTCTTGCTCAATGGCGCCGGACTCGCGCAGGTCGCTGAGGAC--CGGAC 53756 |||||||||||||| ||||| || | ||||||||||||||||| ||||| | ||| Sbjct 437 ACGATGTCGGCGTCCTGCTCGATCGAGCCGGACTCGCGCAGGT--CTGAGATCTGCGGCG 380 Query 53757 GCTTGTCGGGGCGAGACTCGCACCCTCGGTTTAGCTGGCAGAGGGGAAGCACAGGACACC 53816 |||||||| ||| |||| | || ||||| ||||||| || | | || || ||| Sbjct 379 TCTTGTCGGTGCGCTGCTCGGATCCACGGTTCAGCTGGCTGATCGCCACGACGGGGCACT 320 Query 53817 CAATCTCCCTTGCCAACAGCTTCATCTGACGCGA 53850 | | |||| | || | ||||| || | ||||| Sbjct 319 CGAGCTCCTTGGCGAGGAGCTTGATGTTGCGCGA 286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194612109016830