Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_028978.1 Length=60609 Score E Sequences producing significant alignments: (Bits) Value seq29129 86.0 2e-12 >seq29129 Length=645 Score = 86.0 bits (94), Expect = 2e-12 Identities = 95/125 (76%), Gaps = 4/125 (3%) Strand=Plus/Plus Query 38364 GTGGCGGGATAAGGCCGTGTGCGCGCAGACCGACCCCGAAATCTTCTTTCCAGAGCAGGG 38423 ||||| ||| ||| | ||||| ||||||||||||||| ||||| || ||| |||| Sbjct 429 GTGGCAGGAGCGTGCCCTCTGCGCCCAGACCGACCCCGAAGCATTCTTCCCCGAGAAGGG 488 Query 38424 CGGCAGCACCCGCGAGGCCAAGCGCATTTGC--GGCGGCTGCCAGGTGTCCGACGAGTGC 38481 |||| |||||||||||||||||| | ||| | || ||| | || || ||||||| Sbjct 489 CGGCTCGACCCGCGAGGCCAAGCGCGTCTGCCTGACG--TGCGACGTCCGCGGCGAGTGC 546 Query 38482 CTCGA 38486 ||||| Sbjct 547 CTCGA 551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193621163503530