Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq425 93.3 3e-14 >seq425 Length=258412 Score = 93.3 bits (102), Expect = 3e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 |||||||||||| |||||||||| || || | ||||| ||||| || |||||| Sbjct 237436 TGAGCAATCATGCATGTCAACAAGGCATACGATGCAATGTTAAATGGAACTCCAAGACCC 237377 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 ||||| ||||| | || |||| ||| ||||| | |||||| || || ||||||||||| Sbjct 237376 ATGTCAGCTGAGCGTTGATACATTTGACAAGATAACTCCCCATTGGCCACATAAAACTG 237318 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 |||||||||||| |||||||||| || || | ||||| || || || |||||| Sbjct 251479 TGAGCAATCATGCATGTCAACAAGGCATACGATGCAATGTTAAATGGCACTCCAAGACCC 251538 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 || || ||||| | || |||| ||| ||||| | ||||||||| || ||||||||||| Sbjct 251539 ATATCAGCTGAGCGTTGATACATTTGACAAGATAACTCCCCGTTGGCCACATAAAACTG 251597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414024620706460