Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_030901.1 Length=92618 Score E Sequences producing significant alignments: (Bits) Value seq59516 192 3e-44 >seq59516 Length=1985 Score = 192 bits (212), Expect = 3e-44 Identities = 251/345 (73%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 70870 TGGCAAACGACACCGTGATCACCGTGATCGGAAATCTGACCGCCGATCCCGAACTGCGCT 70929 ||||| ||| || | |||||||| ||||| || ||||||| ||| || || || | Sbjct 1295 TGGCAGGCGAAACGATCATCACCGTCATCGGCAACCTGACCGACGACCCGGAGCTCAAGT 1236 Query 70930 TCACCCCCTCGGGCGCGCCGGTCGCCAACTTCACCGTCGCAAGCACCCCGCGGTACTTCG 70989 |||| || |||||||| | || ||||||||||||||||| || || || | ||| Sbjct 1235 TCACTCCTTCGGGCGCCGCAGTTGCCAACTTCACCGTCGCGTCGACGCCTCGAACCCTCG 1176 Query 70990 ACAAGCAGTCCAACGAGTGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAACATCTGGC 71049 | ||| |||||||||||||||||| |||||| || ||| | |||||| | ||||| Sbjct 1175 ATCGTCAGACCAACGAGTGGAAGGACGGCGAGGCTCTGTTCATTCGCTGCGCCGCCTGGC 1116 Query 71050 GCGAGCCGGCCGAGAACGTCACCGAGTCGCTGTCCAAGGGCATGCGCGTCATCGTCCAGG 71109 || ||| |||||||||||| ||||||||||| ||||| || ||||||||||||| Sbjct 1115 GCCAGCTCGCCGAGAACGTCGCCGAGTCGCTGCAGAAGGGTCAGCAGGTCATCGTCCAGG 1056 Query 71110 GTCGCCTCAAGCA-GCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAG 71168 | | || |||| |||| ||||||| |||| || | | | ||| | ||||| Sbjct 1055 GCCCGCT-GAGCATCCGCAACTACGAGCGTCAGGACGGATCGCGCGGCACGAGCGTCGAG 997 Query 71169 CTCGAGGTCGAGGAGATCGGCCCCGCGCTGCGGTACGCCACCGCC 71213 | |||| | |||||||| || ||||||| | ||| |||||| Sbjct 996 ATGACGGTCAACGAGATCGGTCCGTCGCTGCGCTTCGCGACCGCC 952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 295929598841785