Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_030911.1 Length=45858 Score E Sequences producing significant alignments: (Bits) Value seq59516 221 4e-53 >seq59516 Length=1985 Score = 221 bits (244), Expect = 4e-53 Identities = 264/356 (74%), Gaps = 2/356 (1%) Strand=Plus/Minus Query 36169 ACATGGCAGGCGAAACCATCATCACGGTAATCGGCAACCTGACAGCCGATCCGGAACTGC 36228 |||||||||||||||| |||||||| || |||||||||||||| | ||| ||||| || Sbjct 1298 ACATGGCAGGCGAAACGATCATCACCGTCATCGGCAACCTGACCGACGACCCGGAGCTCA 1239 Query 36229 GGTTCACTCCGTCCGGCGCGGCGGTCGCGAACTTCACGGTCGCTTCGACTCCGCGACAGT 36288 ||||||||| || ||||| || || || |||||||| ||||| ||||| || ||| Sbjct 1238 AGTTCACTCCTTCGGGCGCCGCAGTTGCCAACTTCACCGTCGCGTCGACGCCTCGAACCC 1179 Query 36289 TCGACCGGGACGCGAACGAGTGGAAGGACGGCGATCCGCTGTTCATGCGCTGCAACCTGT 36348 |||| || | | |||||||||||||||||||| | |||||||| |||||| | | Sbjct 1178 TCGATCGTCAGACCAACGAGTGGAAGGACGGCGAGGCTCTGTTCATTCGCTGCGCCGCCT 1119 Query 36349 GGCGTGACGCGGCGGAGAACGTCACGGACTCGCTGTCGAAGGGGACTCGGGTCATCGTGC 36408 |||| | || ||||||||| | || |||||| |||||| | ||||||||| | Sbjct 1118 GGCGCCAGCTCGCCGAGAACGTCGCCGAGTCGCTGCAGAAGGGTCAGCAGGTCATCGTCC 1059 Query 36409 AGGGCCGGCTGAAACAGCGGAGCTACGAGGACAAAGAGGGCGTCACGCGG-ACCATCGTC 36467 |||||| ||||| || | ||||||| | || || || ||||| || | |||| Sbjct 1058 AGGGCCCGCTGAGCATCCGCAACTACGAGCGTCAGGACGG-ATCGCGCGGCACGAGCGTC 1000 Query 36468 GAGCTGGAAGTGGACGAGATCGGTCCGTCCCTGAAGTACGCGACGGCGAACGTGAC 36523 ||| || || |||||||||||||||| ||| | |||||| || || || || Sbjct 999 GAGATGACGGTCAACGAGATCGGTCCGTCGCTGCGCTTCGCGACCGCCAAGGTCAC 944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146468140062600