Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq59516 212 4e-50 >seq59516 Length=1985 Score = 212 bits (234), Expect = 4e-50 Identities = 262/355 (74%), Gaps = 5/355 (1%) Strand=Plus/Minus Query 69624 ATGGCAAATGACACCGTCATCACCGTCATCGGTAACCTGACCGCCGACCCCGAACTCCGG 69683 |||||| || || |||||||||||||||| |||||||||| |||||| || ||| | Sbjct 1296 ATGGCAGGCGAAACGATCATCACCGTCATCGGCAACCTGACCGACGACCCGGAGCTCAAG 1237 Query 69684 TTCACGCCCTCCGGTGCCGCGGTCGCGAACTTCACCGTCGCGTCGACCCCGCGGTACTTC 69743 ||||| || || || ||||| || || |||||||||||||||||||| || || | || Sbjct 1236 TTCACTCCTTCGGGCGCCGCAGTTGCCAACTTCACCGTCGCGTCGACGCCTCGAACCCTC 1177 Query 69744 GACAAGCAGTCGAACGAGTGGAAGGATGCCGAGGCACTCTTCCTGCGCTGCAACGTCTGG 69803 || ||| | |||||||||||||| | |||||| || ||| | |||||| || |||| Sbjct 1176 GATCGTCAGACCAACGAGTGGAAGGACGGCGAGGCTCTGTTCATTCGCTGCGCCGCCTGG 1117 Query 69804 CGCGAGTACGCCGAGAACGTGACTGAGTCGCTCCAGAAGGGCGCCCGCGTCATCGTCCAG 69863 ||| || |||||||||||| | |||||||| |||||||| | |||||||||||| Sbjct 1116 CGCCAGCTCGCCGAGAACGTCGCCGAGTCGCTGCAGAAGGGTCAGCAGGTCATCGTCCAG 1057 Query 69864 GGCAAGCTCAAGCA-GCGGTCCTACGAG---AAGGATGGCCAGCCGCGCACCACCTTCGA 69919 ||| ||| |||| || ||||||| |||| || || |||| | | |||| Sbjct 1056 GGCCCGCT-GAGCATCCGCAACTACGAGCGTCAGGACGGATCGCGCGGCACGAGCGTCGA 998 Query 69920 GCTCGAGGTTGAGGAGATCGGCCCCGCACTCCGGTACGCCACCGCCCGGGTCACC 69974 | | ||| | |||||||| || | || || | ||| |||||| ||||||| Sbjct 997 GATGACGGTCAACGAGATCGGTCCGTCGCTGCGCTTCGCGACCGCCAAGGTCACC 943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 298995050891270