Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_030936.1 Length=93843 Score E Sequences producing significant alignments: (Bits) Value seq59516 196 3e-45 >seq59516 Length=1985 Score = 196 bits (216), Expect = 3e-45 Identities = 252/345 (73%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 72299 TGGCAAACGACACCGTGATCACCGTGATCGGAAACCTGACCGCCGATCCCGAACTGCGCT 72358 ||||| ||| || | |||||||| ||||| |||||||||| ||| || || || | Sbjct 1295 TGGCAGGCGAAACGATCATCACCGTCATCGGCAACCTGACCGACGACCCGGAGCTCAAGT 1236 Query 72359 TCACCCCCTCGGGTGCGCCGGTCGCCAACTTCACCGTCGCAAGCACCCCCCGGTACTTCG 72418 |||| || ||||| || | || ||||||||||||||||| || || || | ||| Sbjct 1235 TCACTCCTTCGGGCGCCGCAGTTGCCAACTTCACCGTCGCGTCGACGCCTCGAACCCTCG 1176 Query 72419 ACAAGCAGAGCAACGAGTGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAACATCTGGC 72478 | |||| ||||||||||||||||| |||||| || ||| | |||||| | ||||| Sbjct 1175 ATCGTCAGACCAACGAGTGGAAGGACGGCGAGGCTCTGTTCATTCGCTGCGCCGCCTGGC 1116 Query 72479 GCGAGCCGGCCGAGAACGTCGCCGAGTCGCTGACCAAGGGCATGCGCGTCATCGTCCAGG 72538 || ||| |||||||||||||||||||||||| ||||| || ||||||||||||| Sbjct 1115 GCCAGCTCGCCGAGAACGTCGCCGAGTCGCTGCAGAAGGGTCAGCAGGTCATCGTCCAGG 1056 Query 72539 GACGCCTCAAGCA-GCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAG 72597 | | || |||| |||| ||||||| |||| || | | | ||| | ||||| Sbjct 1055 GCCCGCT-GAGCATCCGCAACTACGAGCGTCAGGACGGATCGCGCGGCACGAGCGTCGAG 997 Query 72598 CTCGAGGTCGAGGAGATCGGCCCCGCGCTGCGGTACGCCACCGCC 72642 | |||| | |||||||| || ||||||| | ||| |||||| Sbjct 996 ATGACGGTCAACGAGATCGGTCCGTCGCTGCGCTTCGCGACCGCC 952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299845322262660