Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_031252.1 Length=51290 Score E Sequences producing significant alignments: (Bits) Value seq59516 161 3e-35 >seq59516 Length=1985 Score = 161 bits (178), Expect = 3e-35 Identities = 176/234 (75%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 30898 ATGGCCGGTGAAACAACGATCACAGTGATCGGAAACCTGACGAACGATCCAGAGCTACGG 30957 ||||| || ||||| | ||||| || ||||| |||||||| |||| || ||||| | Sbjct 1296 ATGGCAGGCGAAACGATCATCACCGTCATCGGCAACCTGACCGACGACCCGGAGCTCAAG 1237 Query 30958 TTCACGCCGTCTGGCAGCGCTGTCGCGAACTTCACGATCGCGAGCACACCGCGAACGTTC 31017 ||||| || || ||| ||| || || |||||||| ||||| || || ||||| || Sbjct 1236 TTCACTCCTTCGGGCGCCGCAGTTGCCAACTTCACCGTCGCGTCGACGCCTCGAACCCTC 1177 Query 31018 GATCGACAGTCAAACGAGTGGAAAGACGGCGAGACGCTCTTCCTGCGCGCTGCTGTCTGG 31077 ||||| ||| | ||||||||||| ||||||||| | || ||| | ||| || | |||| Sbjct 1176 GATCGTCAGACCAACGAGTGGAAGGACGGCGAGGCTCTGTTCATTCGCTGCGCCGCCTGG 1117 Query 31078 CGCGAGACTGCAGAGAATGTCGCAGAGTCCCTGCAGAAGGGCATGGAGGTCATC 31131 ||| || || ||||| ||||| ||||| ||||||||||| | |||||||| Sbjct 1116 CGCCAGCTCGCCGAGAACGTCGCCGAGTCGCTGCAGAAGGGTCAGCAGGTCATC 1063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163832062734360