Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq4164 118 9e-22 seq993 114 1e-20 >seq4164 Length=15189 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | ||| || ||||| |||||||||||||| ||| Sbjct 455 CCTCCACGAAGACGGAGGACCAGGTGGAGAGTAGATTCCTTCTGAATGTTATAGTCGGCC 396 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| || ||||||| |||||||| || || | || || ||||| |||||| || Sbjct 395 AAGGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATCAGCCTCTGTTGGTCCGGCGGG 336 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| ||||| | | ||| || || | ||| | Sbjct 335 ATACCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCCACT 276 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | ||| || ||||| ||||| | ||||| || || ||||||||| Sbjct 275 TCTAGGGTGATCGTCTTTCCGGTGAGGGTTTTCACGAAGATTTGCATT 228 >seq993 Length=3989 Score = 114 bits (126), Expect = 1e-20 Identities = 165/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || ||||| ||||||| || | |||| |||||| || ||||| || || | Sbjct 3396 TTCCTCCACGAAGCCTCAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAG 3455 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | || || || | ||||||||||| ||||| || | || || |||||||| || | Sbjct 3456 CGAGTGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCTGGCG 3515 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGC--TC 21124 | | |||||||||||| |||||| || || | | ||| |||| ||| || || Sbjct 3516 GGATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATCGTAT--CCGAGCTTTC 3573 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| ||| ||||| || ||||| | || || |||||||| ||||| Sbjct 3574 GACTTCCAAGGTTATGGTTTTCCCGGTGAGGGTCTTCACAAATATCTGCAT 3624 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | |||||||||||| || ||||| || || || Sbjct 3626 CCACCACGGAGACGGAGGACTAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGCG 3685 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||||||| || || ||| | || | |||||||||||| || Sbjct 3686 AGTGTGCGGCCATCCTCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGG 3745 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||| ||||| | | ||| ||||| | ||| Sbjct 3746 ATACCCTCCTTGTCCTGAATCTTAGCCTTCACGTTGTCGATTGTATCTGAGCTCTCGACC 3805 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| ||||| || || || | ||| ||||| || || ||||| Sbjct 3806 TCCAGGGTGATGGTTTTCCCTGTGAGCGTCTTGACGAAAATCTGCAT 3852 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | ||||||||||||||| ||||| ||||| || Sbjct 3854 CCACCACGAAGACGGAGGACTAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGCA 3913 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||| ||||| ||||| || | || || |||||||| || ||| Sbjct 3914 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCTGGGGGA 3973 Query 21069 ACGCCTTCCTTGTC 21082 | |||||| ||||| Sbjct 3974 ATGCCTTCTTTGTC 3987 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| || || || | ||||| | || | |||||||||||| ||||||||||| || || Sbjct 3169 TCCTCCACGGAGACGAAGCACAAGGTGAAGAGTGGACTCCTTCTGAATGTTATAATCTGC 3228 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 || || | || |||||||| || || ||| |||| || ||||||||||| || Sbjct 3229 AAGAGTCCTTCCATCTTCCAGCTGCTTCCCAGCAAAAATCAGCCTCTGCTGGTCTGGTGG 3288 Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127 | ||||||||||| || || || || | | ||| ||||| | |||| Sbjct 3289 GATACCTTCCTTGTCTTGAATTTTCGCCTTGACGTTGTCGATGGTATCGGAGCTCTCCAC 3348 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| || || ||||| ||||| | || || || || || |||||| Sbjct 3349 CTCCAACGTGATCGTCTTCCCGGTCAGAGTCTTCACGAAGATCTGCATT 3397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422204217101744