Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq3882 152 5e-32 seq4164 129 6e-25 seq993 123 3e-23 seq560 111 2e-19 >seq3882 Length=2978 Score = 152 bits (168), Expect = 5e-32 Identities = 215/302 (71%), Gaps = 0/302 (0%) Strand=Plus/Plus Query 116594 AACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAA 116653 |||||| |||| ||| || || || || || |||||| | || ||| |||||||| Sbjct 361 AACCCCGGCCGATTCTCCATGTTTCCGATCCAGTACCCGCAGATCTGGGAGATGTACAAG 420 Query 116654 AAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGAC 116713 || || ||||| || |||||||| | || ||||| || || ||| | ||| | || Sbjct 421 AAAGCGGAGGCTTCCTTCTGGACGGCGGAAGAGGTCGATCTCTCCGACGACCTCCGTCAC 480 Query 116714 TGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCC 116773 ||||| | | | | | ||||| || ||| |||| |||| || ||||| |||||| Sbjct 481 TGGGAATCCCTCACCTCCGACGAGAAACACTTCGTCAAATACGTCCTCGCCTTCTTCGCC 540 Query 116774 GCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTG 116833 ||| |||||| |||||| |||||| || | || || ||| ||||||||||| Sbjct 541 GCCTCCGACGGGATCGTCCTCGAGAACCTCGCCGGCCGATTCATGACCGAGGTGCAGGTC 600 Query 116834 GCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATG 116893 | ||||| || ||||||||| || |||||||| || |||||| | ||||| || ||| Sbjct 601 TCGGAGGCCCGAGCCTTCTACGGATTCCAGATCGCGATCGAGAACATCCACTCCGAGATG 660 Query 116894 TA 116895 || Sbjct 661 TA 662 >seq4164 Length=15189 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| ||||| |||||||| |||||| | || || ||| | || Sbjct 1 ATGCAGATCTTCGTGAAAACTCTCACCGGCAAAACTATCACCCTTGAGGTTGAAAGCTCC 60 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || || | || ||||| || || ||| | ||||| Sbjct 61 GACACAATCGATAACG-TCAAGGCCAAGATCCAGGATAAAGAAGGAATACCCCCAGACCA 119 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || | || |||| ||| || |||||||| || |||| |||||||| ||||||||| Sbjct 120 ACAGAGGCTTATCTTCGCCGGAAAACAGCTCGAGGACGGCCGCACCCTTGCCGACTACAA 179 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || ||| | || | ||| | | ||||| Sbjct 180 CATCCAGAAGGAATCGACCCTCCATTTGGTCCTCCGCCTCCGCGGCGG 227 >seq993 Length=3989 Score = 123 bits (136), Expect = 3e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || |||||||| || |||||||||||| | || ||||| | | Sbjct 3852 ATGCAGATTTTCGTCAAGACGCTCACAGGGAAAACCATCACCCTGGAGGTCGAGAGCTCA 3793 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| | |||| || |||| ||||| ||||| ||||| ||||||| Sbjct 3792 GATACAATCGACAACG-TGAAGGCTAAGATTCAGGACAAGGAGGGTATCCCACCGGACCA 3734 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| || || || |||||||| || | ||||| ||| || ||||| Sbjct 3733 GCAGAGGTTGATCTTTGCCGGAAAGCAGCTGGAGGATGGCCGCACACTCGCTGATTACAA 3674 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| |||| || || ||||| Sbjct 3673 CATCCAGAAGGAGTCCACTCTCCACCTAGT 3644 Score = 113 bits (124), Expect = 5e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| ||||| || || || ||||| || |||||||| ||| | || |||||| | | Sbjct 3624 ATGCAGATATTTGTGAAGACCCTCACCGGGAAAACCATAACCTTGGAAGTCGAAAGCTCG 3565 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| |||||| || || | ||||| || |||||||| | || || Sbjct 3564 GATACGATCGACAACG-TCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCGCCAGATCA 3506 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | ||||||| ||| ||||| |||||||| || | || || ||| || ||||| Sbjct 3505 GCAGAGGCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACACTCGCTGATTACAA 3446 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| ||| || || Sbjct 3445 CATCCAGAAGGAGAGCACTCTTCA 3422 Score = 96.9 bits (106), Expect = 4e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 |||||||| ||||| ||| | || ||||| | || |||| ||| ||||| ||||| || Sbjct 3987 GACAAAGAAGGCATTCCCCCAGATCAGCAGAGGCTGATCTTCGCTGGCAAGCAGCTCGAG 3928 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || | |||||||| |||||||||||||| |||||| |||| || |||||||| Sbjct 3927 GATGGCCGCACCCTTGCTGACTACAACATCCAAAAGGAGTCCACTCTCCATCTAGT 3872 >seq560 Length=29322 Score = 111 bits (122), Expect = 2e-19 Identities = 166/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| ||||| || ||||| || || ||||| | || || ||| || Sbjct 29322 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGTTGAATCC 29263 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||||| | | |||| | |||| || |||| || || || || || || |||| Sbjct 29262 TCCGACACGATCGACAACG-TGAAGGCGAAGATTCAGGATAAGGAAGGAATTCCGCCGGA 29204 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||||| || ||||| | ||| || || || || || |||| || || ||| |||||| Sbjct 29203 TCAGCAGCGGCTCATTTTCGCCGGTAAGCAACTCGAGGACGGCCGGACGCTCGCCGACTA 29144 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918 ||||||||||||||| | || || || || || | ||| | | ||||||| Sbjct 29143 CAACATCCAGAAGGAATCGACTCTTCACCTCGTCCTCCGCCTCCGCGGCGGCG 29091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515150392475840