Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq993 118 9e-22 seq4164 111 1e-19 >seq993 Length=3989 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| || | |||| ||||||||| | || ||| || || ||||||||||| Sbjct 3398 CCTCCACGAAGCCTCAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGCG 3457 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || || |||||| ||||| || || ||| ||||||| | ||||||||| || || Sbjct 3458 AGTGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCTGGCGGG 3517 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 ||||| |||||||| || || || || | |||| || |||| ||| ||||| Sbjct 3518 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATCGTATCCGAGCTTTCGACT 3577 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || | ||| | ||||| ||||| || || || ||||| ||||||||| Sbjct 3578 TCCAAGGTTATGGTTTTCCCGGTGAGGGTCTTCACAAATATCTGCATG 3625 Score = 109 bits (120), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || ||||||||||| | ||||| |||||| ||||| Sbjct 3649 GTGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGCGAGTGTGCGGCCATCCTCCAGCTG 3708 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 ||||| || |||| | | |||||| || || || || ||||||||||| ||| || Sbjct 3709 CTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGAATCTT 3768 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| || || | |||||||||||| | ||| | ||||| || || Sbjct 3769 AGCCTTCACGTTGTCGATTGTATCTGAGCTCTCGACCTCCAGGGTGATGGTTTTCCCTGT 3828 Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739 || || || || |||||||||||| Sbjct 3829 GAGCGTCTTGACGAAAATCTGCATG 3853 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || |||||||| ||||| | ||| | ||| || Sbjct 3187 CACAAGGTGAAGAGTGGACTCCTTCTGAATGTTATAATCTGCAAGAGTCCTTCCATCTTC 3246 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || ||||| | || || | |||||| || || || || || ||||||||| Sbjct 3247 CAGCTGCTTCCCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGGATACCTTCCTTGTCTTG 3306 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 |||||| || || | |||| ||| || | |||||| ||||| | || | ||| || Sbjct 3307 AATTTTCGCCTTGACGTTGTCGATGGTATCGGAGCTCTCCACCTCCAACGTGATCGTCTT 3366 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||||||| || || || |||||||| Sbjct 3367 CCCGGTCAGAGTCTTCACGAAGATCTGCAT 3396 Score = 82.4 bits (90), Expect = 7e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| ||||| |||||||| || | ||||| |||||||||||| Sbjct 3878 TGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCGAGCTGC 3937 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || |||||| |||| || | ||||||||| || || ||||| || ||||| Sbjct 3938 TTGCCAGCGAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCTTTGTC 3987 >seq4164 Length=15189 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| |||| || || || || || |||||||| ||| | ||||| |||||| Sbjct 209 ACCAAATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCG 150 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||||||||| ||| |||| || | ||| || || || ||||| || || || || Sbjct 149 AGCTGTTTTCCGGCGAAGATAAGCCTCTGTTGGTCTGGGGGTATTCCTTCTTTATCCTGG 90 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| ||||| | ||| || ||||| | ||| | |||||| Sbjct 89 ATCTTGGCCTTGACGTTATCGATTGTGTCGGAGCTTTCAACCTCAAGGGTGATAGTTTTG 30 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| |||||||| || || |||||||| Sbjct 29 CCGGTGAGAGTTTTCACGAAGATCTGCAT 1 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| ||||| || || |||||||| || ||| || || || |||||| Sbjct 437 ACCAGGTGGAGAGTAGATTCCTTCTGAATGTTATAGTCGGCCAAGGTCCGGCCGTCCTCG 378 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||||||||| ||| |||| || | ||| || || || || || || |||||||| Sbjct 377 AGCTGTTTTCCGGCGAAGATCAGCCTCTGTTGGTCCGGCGGGATACCTTCCTTGTCCTGG 318 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | ||| || || || | ||| | ||| || Sbjct 317 ATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCCACTTCTAGGGTGATCGTCTTT 258 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || ||||| || || || ||||| Sbjct 257 CCGGTGAGGGTTTTCACGAAGATTTGCAT 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433773910401328