Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq993 145 5e-30 seq560 127 1e-24 >seq993 Length=3989 Score = 145 bits (160), Expect = 5e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || ||||||||||||| ||| | ||| || || ||||| |||||||| || | Sbjct 3397 TCCTCCACGAAGCCTCAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGC 3456 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGG 34280 || |||| | || |||| ||||||||| ||||| ||||||| |||||| || | ||| Sbjct 3457 GAGTGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCTGGCGG 3516 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | | || |||||||| ||||| ||| | | | | |||| ||| | ||||| Sbjct 3517 G-ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATCGTATCCGAGCTTTCGA 3575 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| || |||||||| |||||||| || |||||||| |||||||| Sbjct 3576 CTTCCAAGGTTATGGTTTTCCCGGTGAGGGTCTTCACAAATATCTGCAT 3624 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 34159 GAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTC 34218 |||||| || || || | ||||| ||||| | ||| || ||||| ||||| || || Sbjct 3166 GAATCCTCCACGGAGACGAAGCACAAGGTGAAGAGTGGACTCCTTCTGAATGTTATAATC 3225 Query 34219 GGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGAC 34278 | || | | || |||| |||||| || || ||||| |||| ||||||||| Sbjct 3226 TGCAAGAGTCCTTCCATCTTCCAGCTGCTTCCCAGCAAAAATCAGCCTCTGCTGGTCTGG 3285 Query 34279 GGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTC 34338 || | | |||||||| || || ||| | | | | || | ||||| || Sbjct 3286 TGGGATACCTTCCTTGTCTTGAATTTTCGCCTTGACGTTGTCGATGGTATCGGAGCTCTC 3345 Query 34339 GACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || |||| |||||| || || ||||| ||||| ||||| ||||||||||| Sbjct 3346 CACCTCCAACGTGATCGTCTTCCCGGTCAGAGTCTTCACGAAGATCTGCAT 3396 >seq560 Length=29322 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 |||||||| || | || || ||||| | ||| ||| ||||| ||||||||||||| Sbjct 29093 CCGCCGCGGAGGCGGAGGACGAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCG 29152 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| |||| || | ||||| || |||||||||||||||||||| || || Sbjct 29153 AGCGTCCGGCCGTCCTCGAGTTGCTTACCGGCGAAAATGAGCCGCTGCTGATCCGGCGGA 29212 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||| || ||||| ||| | | | | |||| |||| ||||| || Sbjct 29213 ATTCCTTCCTTATCCTGAATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGGATTCAACC 29272 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||| |||||| || || || || || |||||||| |||||||||||| Sbjct 29273 TCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 29320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323029932391040