Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq993 114 1e-20 seq4164 107 2e-18 seq560 95.1 1e-14 seq3882 87.8 2e-12 >seq993 Length=3989 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||||||||| || || |||||||| | || || || ||| Sbjct 3396 ATGCAGATCTTCGTGAAGACTCTGACCGGGAAGACGATCACGTTGGAGGTGGAGAGCTCC 3337 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | ||||| || ||| ||||||||||| | || || |||||| Sbjct 3336 GATACCATCGACAACGTCAAGGCGAAAATTCAAGACAAGGAAGGTATCCCACCAGACCAG 3277 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || ||||| || ||| ||||||| | |||| | ||||||||| Sbjct 3276 CAGAGGCTGATTTTTGCTGGGAAGCAGCTGGAAGATGGAAGGACTCTTGCAGATTATAAC 3217 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| || || || |||||||| || || ||| Sbjct 3216 ATTCAGAAGGAGTCCACTCTTCACCTTGTGCTT 3184 >seq4164 Length=15189 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| || || || || || || ||||||||| | || || ||| ||| Sbjct 229 ATGCAAATCTTCGTGAAAACCCTCACCGGAAAGACGATCACCCTAGAAGTGGAAAGCTCC 288 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || |||||||||||| | ||||| ||||| Sbjct 289 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGACCAA 348 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || ||||| || |||||| | || ||| ||| || ||| |||||| Sbjct 349 CAGAGGCTGATCTTCGCCGGAAAACAGCTCGAGGACGGCCGGACCTTGGCCGACTATAAC 408 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || ||||| ||||| || ||||| || Sbjct 409 ATTCAGAAGGAATCTACTCTCCACCTGGTCCT 440 >seq560 Length=29322 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| || || || || || || |||||||| | || |||||| | Sbjct 29322 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGTTGAATCC 29263 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| |||| | || || || || ||| |||||||| | ||||| || Sbjct 29262 TCCGACACGATCGACAACGTGAAGGCGAAGATTCAGGATAAGGAAGGAATTCCGCCGGAT 29203 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||| || || || | || ||| ||| | ||| || Sbjct 29202 CAGCAGCGGCTCATTTTCGCCGGTAAGCAACTCGAGGACGGCCGGACGCTCGCCGACTAC 29143 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || |||||||||||||| || || || Sbjct 29142 AACATCCAGAAGGAATCGACTCTTCACCTCGTCCT 29108 >seq3882 Length=2978 Score = 87.8 bits (96), Expect = 2e-12 Identities = 196/289 (68%), Gaps = 8/289 (3%) Strand=Plus/Plus Query 57545 CATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTT 57604 |||||||||||| | || || | || ||| | |||||||| || || || || || || Sbjct 378 CATGTTTCCGATCCAGTACCCGCAGATCTGGGAGATGTACAAGAAAGCGGAGGCTTCCTT 437 Query 57605 TTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGA 57664 ||||| | ||||| || || || || | || || | | ||||| ||||||| Sbjct 438 CTGGACGGCGGAAGAGGTCGATCTCTCCGACGACCTCCGTCACTGGGAATCCCTCA---C 494 Query 57665 ATCTGA-GAGAA--ATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTAT 57721 || || ||||| | || | ||| |||| | || || |||||||| ||||| || || Sbjct 495 CTCCGACGAGAAACACTTCGTCAAATACGTCCTCGCCTTCTTCGCCGCCTCCGACGGGAT 554 Query 57722 TGTTAACGAGAATTTGGTCGAAAGATT-TTCACAAGAAGTGCAAGTGACGGAGGCGAGAT 57780 || |||||| | | || |||| | || || ||||| || ||||||| || Sbjct 555 CGTCCTCGAGAACCTCGCCGGCCGATTCATGAC-CGAGGTGCAGGTCTCGGAGGCCCGAG 613 Query 57781 GCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTA 57829 ||| |||||||| || | || || || ||| | || || || ||||| Sbjct 614 CCTTCTACGGATTCCAGATCGCGATCGAGAACATCCACTCCGAGATGTA 662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445706867897280