Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq4164 136 9e-27 seq560 127 5e-24 seq993 123 6e-23 seq3994 84.2 5e-11 >seq4164 Length=15189 Score = 136 bits (150), Expect = 9e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || | || || | ||| | || ||||| ||||| || || ||||| Sbjct 230 ATTCCGCCGCGGAGGCGGAGGACCAAATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCG 171 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | ||||| || || |||||||| || || || ||||||||||| || || Sbjct 170 GCAAGGGTGCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATAAGCCTCTGTTGGTCTGGG 111 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 |||||||||||||||||||| ||||| || || || || || | || ||| ||| Sbjct 110 GGTATTCCTTCTTTATCCTGGATCTTGGCCTTGACGTTATCGATTGTGTCGGAGCTTTCA 51 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || ||||| || || || || ||||| || || |||||||| Sbjct 50 ACCTCAAGGGTGATAGTTTTGCCGGTGAGAGTTTTCACGAAGATCTGCAT 1 Score = 127 bits (140), Expect = 5e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||| |||||||| |||||||| | | || | ||||| || || |||||||| Sbjct 425 GTAGATTCCTTCTGAATGTTATAGTCGGCCAAGGTCCGGCCGTCCTCGAGCTGTTTTCCG 366 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || ||||||||||| || || || || ||||| || ||||| ||||| || || Sbjct 365 GCGAAGATCAGCCTCTGTTGGTCCGGCGGGATACCTTCCTTGTCCTGGATCTTGGCCTTC 306 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| ||| ||| || ||||| || || ||||| || || || ||| Sbjct 305 ACGTTGTCGATGGTGTCGGAGCTTTCCACTTCTAGGGTGATCGTCTTTCCGGTGAGGGTT 246 Query 104543 TTTACAAATATCTGCATT 104560 || || || || |||||| Sbjct 245 TTCACGAAGATTTGCATT 228 >seq560 Length=29322 Score = 127 bits (140), Expect = 5e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||| || || ||||| | || || | ||||| || ||||| || || Sbjct 29123 GTCGATTCCTTCTGGATGTTGTAGTCGGCGAGCGTCCGGCCGTCCTCGAGTTGCTTACCG 29182 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| |||| ||| ||||| || || |||||||| |||||||||||||| || || Sbjct 29183 GCGAAAATGAGCCGCTGCTGATCCGGCGGAATTCCTTCCTTATCCTGAATCTTCGCCTTC 29242 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | || ||| | ||| ||||| | || || ||||| || || || ||| Sbjct 29243 ACGTTGTCGATCGTGTCGGAGGATTCAACCTCCAACGTGATCGTCTTCCCCGTTAGGGTT 29302 Query 104543 TTTACAAATATCTGCATTTT 104562 || || || |||||||| || Sbjct 29303 TTCACGAAGATCTGCATCTT 29322 >seq993 Length=3989 Score = 123 bits (136), Expect = 6e-23 Identities = 158/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || |||||||| ||||| || | ||||| || || || Sbjct 3184 AAGCACAAGGTGAAGAGTGGACTCCTTCTGAATGTTATAATCTGCAAGAGTCCTTCCATC 3243 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| || || || ||||||||||| |||||||| || || || || || ||||| || || Sbjct 3244 TTCCAGCTGCTTCCCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGGATACCTTCCTTGTC 3303 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 ||||| || || || || || || | ||||||| || | || ||||| | || || | Sbjct 3304 TTGAATTTTCGCCTTGACGTTGTCGATGGTATCG-GAGCTCTCCACCTCCAACGTGATCG 3362 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 |||| || || || || || || || ||||||||| Sbjct 3363 TCTTCCCGGTCAGAGTCTTCACGAAGATCTGCATT 3397 Score = 93.3 bits (102), Expect = 1e-13 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || ||||| || | || || || ||||| || || || |||| || || | || || Sbjct 3641 AGGACTAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGCGAGTGTGCGGCCATCC 3700 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || ||||| ||||| || | |||||| || || || || || || || || ||| Sbjct 3701 TCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCC 3760 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGT 104526 |||||||| || || || || || | ||||| || | || ||||| || || || || Sbjct 3761 TGAATCTTAGCCTTCACGTTGTCGATTGTATC-TGAGCTCTCGACCTCCAGGGTGATGGT 3819 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || || || |||||||| Sbjct 3820 TTTCCCTGTGAGCGTCTTGACGAAAATCTGCAT 3852 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || || || |||| || || | || || || || || || || || || Sbjct 3434 TCCTTCTGGATGTTGTAATCAGCGAGTGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAG 3493 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || |||||||| ||||| || || || ||||| || ||||| ||||| || || || || Sbjct 3494 ATGAGCCTCTGCTGATCTGGCGGGATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTG 3553 Query 104489 TCTACGGTATCGCTAGGTT-CTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | ||||| | || || | || || | || || || || || || || || || || Sbjct 3554 TCGATCGTATC-CGAGCTTTCGACTTCCAAGGTTATGGTTTTCCCGGTGAGGGTCTTCAC 3612 Query 104548 AAATATCTGCAT 104559 |||||||||||| Sbjct 3613 AAATATCTGCAT 3624 >seq3994 Length=11157 Score = 84.2 bits (92), Expect = 5e-11 Identities = 83/106 (78%), Gaps = 1/106 (1%) Strand=Plus/Plus Query 269178 CTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTA 269237 ||||||| || | |||||| ||||||| || || || ||||| || || | ||||| | Sbjct 10306 CTTTTGC-GCCGTTTTTTGGCTGAAGAAGAGGGGGCTGATGCCCGGCTTGGCGTTCTCCA 10364 Query 269238 ACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTG 269283 ||||| |||| ||| |||||||| | ||||||||||||||||| Sbjct 10365 ACGAACTGATTTCCAGAGACGAAGGCCTTCACTGCGACTTCGCTTG 10410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151240786512272